RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 HACD1B0YJ81 288 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 TPD52L2O43399 206 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF12P17014 697 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 UBE3AQ05086 875 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 DGCR6Q14129 220 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 RHBDF2Q6PJF5 856 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SCN4BQ8IWT1 228 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 MIER2Q8N344 545 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 PPP1R2P1Q96PQ5 205 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 FADS3Q9Y5Q0 445 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 A0A1B0GVG6 124 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 DYTNA2CJ06 578 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 DLDP09622 509 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 HOXD13P35453 343 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 GEMP55040 296 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 GPX6P59796 221 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SQLEQ14534 574 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF235Q14590 738 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 FAM136AQ96C01 138 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 KAT6AQ92794 2004 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 POU4F1Q01851 419 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 ZC3H12AQ5D1E8 599 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 BTBD8Q5XKL5 378 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 TWF2Q6IBS0 349 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 TAS2R42Q7RTR8 314 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 ZBTB8BQ8NAP8 495 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 UTP4Q969X6 686 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 GPATCH1Q9BRR8 931 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 REXO4Q9GZR2 422 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 MED26O95402 600 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 ALOX12P18054 663 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 PRDX6P30041 224 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 NPY2RP49146 381 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF846Q147U1 533 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 INSCQ1MX18 579 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 OR8H2Q8N162 312 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 CD101Q93033 1021 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 SOAT2O75908 522 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 PENKP01210 267 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 LSM3P62310 102 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 PPM1JQ5JR12 505 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 TTC23Q5W5X9 447 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 ZPBP2Q6X784 338 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 TREML1Q86YW5 311 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 LPGAT1Q92604 370 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 OMDQ99983 421 aa16.24■□□□□ 0.19
CLSTN1-201ENST00000361311 RHOBTB1O94844 696 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 RALGDSQ12967 914 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 PTPN20Q4JDL3 420 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF470Q6ECI4 717 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 PIWIL4Q7Z3Z4 852 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 RBM12BQ8IXT5 1001 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 CENPLQ8N0S6 344 aaPredicted RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 UBR7Q8N806 425 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 ABCB10Q9NRK6 738 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 EGFL7Q9UHF1 273 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 MTF2Q9Y483 593 aaPredicted RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 HS6ST1O60243 411 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 CABYRO75952 493 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 TCF7P36402 384 aaPredicted RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 MSLNQ13421 630 aaPredicted RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 TTLL4Q14679 1199 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 DEPDC1Q5TB30 811 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 ZC3H3Q8IXZ2 948 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 FAM156AQ8NDB6 213 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 KCTD4Q8WVF5 259 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 FICDQ9BVA6 458 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 C1orf21Q9H246 121 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 ZFYVE28Q9HCC9 887 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 PTPRHQ9HD43 1115 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 CASS4Q9NQ75 786 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 NDFIP2Q9NV92 336 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 C2P06681 752 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 BCAT1P54687 386 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 SLC6A3Q01959 620 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 GALNT18Q6P9A2 607 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 GK5Q6ZS86 529 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 COQ7Q99807 217 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 KLF11O14901 512 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 SEC24AO95486 1093 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 CD48P09326 243 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 SOX6P35712 828 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 VAC14Q08AM6 782 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 FSTL1Q12841 308 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 DEFB132Q7Z7B7 95 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 RELL1Q8IUW5 271 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 NAT8LQ8N9F0 302 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms