RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 COL6A6A6NMZ7 2263 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 B8ZZF3 427 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 RTN2O75298 545 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 APOEP02649 317 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 MPOP05164 745 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 GP1BAP07359 652 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 CKMT1AP12532 417 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 DGKAP23743 735 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 OXCT1P55809 520 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 GABREP78334 506 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 CNGA2Q16280 664 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 ARHGAP40Q5TG30 622 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 TCERG1LQ5VWI1 586 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 CDCP2Q5VXM1 449 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 APCDD1Q8J025 514 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 SLC25A45Q8N413 288 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 DQX1Q8TE96 717 aaKnown RBP14.28□□□□□ -0.12
VPS29-201ENST00000360579 SNRNP27Q8WVK2 155 aaKnown RBP14.28□□□□□ -0.12
VPS29-201ENST00000360579 MYEOVQ96EZ4 313 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 SLC39A13Q96H72 371 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 CLMPQ9H6B4 373 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 POLR1BQ9H9Y6 1135 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 USP29Q9HBJ7 922 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 CPNE5Q9HCH3 593 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 PREBQ9HCU5 417 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 THSD1Q9NS62 852 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 KLHL11Q9NVR0 708 aa14.28□□□□□ -0.12
VPS29-201ENST00000360579 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.12
VPS29-201ENST00000360579 MYLKQ15746 1914 aa14.27□□□□□ -0.12
VPS29-201ENST00000360579 M0QYV0 167 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 ALOX15BO15296 676 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 OPA1O60313 960 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 USP12O75317 370 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 MOCS2O96007 188 aaPredicted RBP14.27□□□□□ -0.13
VPS29-201ENST00000360579 THEGLP0DJG4 465 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 C6P13671 934 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 SYKP43405 635 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.13
VPS29-201ENST00000360579 DUSP3P51452 185 aaPredicted RBP14.27□□□□□ -0.13
VPS29-201ENST00000360579 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 DPYDQ12882 1025 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 CBWD6Q4V339 395 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 DCAF17Q5H9S7 520 aaPredicted RBP14.27□□□□□ -0.13
VPS29-201ENST00000360579 CBWD3Q5JTY5 395 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 CBWD5Q5RIA9 395 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 TTC39BQ5VTQ0 682 aaPredicted RBP14.27□□□□□ -0.13
VPS29-201ENST00000360579 TMEM270Q6UE05 265 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 BEND5Q7L4P6 421 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 CHSY1Q86X52 802 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 LGI2Q8N0V4 545 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 UBR7Q8N806 425 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 BTN2A3PQ96KV6 586 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 ABCG4Q9H172 646 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
VPS29-201ENST00000360579 ARID1BQ8NFD5 2236 aaPredicted RBP14.26□□□□□ -0.13
VPS29-201ENST00000360579 NEMP2A6NFY4 417 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 F5H5T6 163 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 PIK3R2O00459 728 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 SLC16A3O15427 465 aaKnown RBP14.26□□□□□ -0.13
VPS29-201ENST00000360579 KLK10O43240 276 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 TACR2P21452 398 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 PLK1P53350 603 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 KCNC4Q03721 635 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 DNM1Q05193 864 aaKnown RBP14.26□□□□□ -0.13
VPS29-201ENST00000360579 VAC14Q08AM6 782 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 KCNMA1Q12791 1236 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 CNTN1Q12860 1018 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 AGBL4Q5VU57 503 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 IGF2-ASQ6U949 168 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 TMC6Q7Z403 805 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 FAM181AQ8N9Y4 354 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 TMEM145Q8NBT3 493 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 CLEC4CQ8WTT0 213 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 TFAP2BQ92481 460 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 ERCC4Q92889 916 aaPredicted RBP14.26□□□□□ -0.13
VPS29-201ENST00000360579 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 GRAMD1AQ96CP6 724 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 CCDC97Q96F63 343 aaPredicted RBP14.26□□□□□ -0.13
VPS29-201ENST00000360579 IFT43Q96FT9 208 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 DUSP23Q9BVJ7 150 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 MIS12Q9H081 205 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 NLGN3Q9NZ94 848 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 SLC25A13Q9UJS0 675 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 PPM1HQ9ULR3 514 aa14.26□□□□□ -0.13
VPS29-201ENST00000360579 SPTA1P02549 2419 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 A0A1B0GVM2 712 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 MCF2LO15068 1137 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 FFAR2O15552 330 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 CSO75390 466 aaKnown RBP14.25□□□□□ -0.13
VPS29-201ENST00000360579 FYNP06241 537 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 VAV1P15498 845 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 ZNF18P17022 549 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 METAP1P53582 386 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms