RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TMEM135Q86UB9 458 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 PACS2Q86VP3 889 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 FAM126BQ8IXS8 530 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 NDUFAF2Q8N183 169 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 ZSCAN18Q8TBC5 510 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 CASD1Q96PB1 797 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 CPNE1Q99829 537 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 MRPL9Q9BYD2 267 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 ZFATQ9P243 1243 aa18.69■□□□□ 0.58
PDLIM7-203ENST00000359895 FAM92AA1XBS5 289 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 E9PAM4 449 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 H7C4K7 107 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 MATN3O15232 486 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 BIRC5O15392 142 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 CCNB1P14635 433 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 YWHAQP27348 245 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 GP5P40197 560 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SKIV2L2P42285 1042 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 PGFP49763 221 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 TUBP50607 506 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 MLLT6P55198 1093 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 TBX4P57082 545 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SPDYAQ5MJ70 313 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ACBD5Q5T8D3 534 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 AFMIDQ63HM1 303 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ATG16L1Q676U5 607 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 KYAT3Q6YP21 454 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 CEP57Q86XR8 500 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 RTL3Q8N8U3 475 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SPPL2BQ8TCT7 592 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ATP2A3Q93084 1043 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC39A13Q96H72 371 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 FCRL5Q96RD9 977 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 IL12RB2Q99665 862 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 TMEM175Q9BSA9 504 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 TRIM55Q9BYV6 548 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC13A1Q9BZW2 595 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC40A1Q9NP59 571 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 PCMTD2Q9NV79 361 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 PIH1D1Q9NWS0 290 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 CLIC5Q9NZA1 410 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 HS3ST4Q9Y661 456 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 C2CD2LO14523 706 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 RASSF9O75901 435 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ATP5HO75947 161 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 FBXW10Q5XX13 1052 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 UNC5BQ8IZJ1 945 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ATP6V0D2Q8N8Y2 350 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 C2orf15Q8WU43 125 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ZNF669Q96BR6 464 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 LRRC37BQ96QE4 947 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC39A8Q9C0K1 460 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 ECT2Q9H8V3 914 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 OSER1Q9NX31 292 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 GMIPQ9P107 970 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 GGT7Q9UJ14 662 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 SOX13Q9UN79 622 aa18.68■□□□□ 0.58
PDLIM7-203ENST00000359895 MAFKO60675 156 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 GLRA3O75311 464 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 USP12O75317 370 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 BGNP21810 368 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 GPR15P49685 360 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 GEMP55040 296 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 NCALDP61601 193 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 ANO4Q32M45 955 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 ANKRD20A4Q4UJ75 823 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 SDHAF4Q5VUM1 108 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 FUT10Q6P4F1 479 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 CDHR3Q6ZTQ4 885 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 NPAS4Q8IUM7 802 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 CNTD1Q8N815 330 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 STKLD1Q8NE28 680 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 PTPRN2Q92932 1015 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 FBXO32Q969P5 355 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 SPATA17Q96L03 361 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 GPR62Q9BZJ7 368 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 GLOD4Q9HC38 313 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 NPHS2Q9NP85 383 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 TLR8Q9NR97 1041 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 TXLNGQ9NUQ3 528 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 PPARGC1AQ9UBK2 798 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 DCDC2Q9UHG0 476 aa18.67■□□□□ 0.58
PDLIM7-203ENST00000359895 HTTP42858 3142 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 MOCS2O96007 188 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 ITGA2BP08514 1039 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 CPB1P15086 417 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 SPRP35270 261 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC11A1P49279 550 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 PDE1BQ01064 536 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 GPR17Q13304 367 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 MTA1Q13330 715 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 GPNMBQ14956 572 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 TRIP4Q15650 581 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 INSCQ1MX18 579 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 ARTNQ5T4W7 220 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 CCDC117Q8IWD4 279 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 ARMC2Q8NEN0 867 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms