RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CRB1P82279 1406 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZNF839A8K0R7 811 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 COX7A2P14406 83 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 HSD17B2P37059 387 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SLC26A3P40879 764 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ALDH3A2P51648 485 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 IST1P53990 364 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZNF280DQ6N043 979 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SERPINA13PQ6UXR4 307 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 JAZF1Q86VZ6 243 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 KIF2BQ8N4N8 673 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 MIEF2Q96C03 454 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 AIF1LQ9BQI0 150 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TRIM36Q9NQ86 728 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 MRPL17Q9NRX2 175 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 AMACRQ9UHK6 382 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ARL2BPQ9Y2Y0 163 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PTCH1Q13635 1447 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TRIM49D1C9J1S8 452 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 RBAK-RBAKDNI3L0D1 243 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PCCBP05166 539 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 AXLP30530 894 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 OVGP1Q12889 678 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TARBP1Q13395 1621 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 AMZ1Q400G9 498 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 FAM91A1Q658Y4 838 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PSRC1Q6PGN9 363 aaPredicted RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZNF280BQ86YH2 543 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 DEFB119Q8N690 84 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 HCAR2Q8TDS4 363 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SETD7Q8WTS6 366 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 C9orf72Q96LT7 481 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TMEM68Q96MH6 324 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 BPIFA1Q9NP55 256 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 NCDNQ9UBB6 729 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PSMD13Q9UNM6 376 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SMAPO00193 183 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PNMA6AP0CW24 399 aaPredicted RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZNF16P17020 682 aaPredicted RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 CASP4P49662 377 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 MPP2Q14168 576 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 C16orf46Q6P387 395 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZZZ3Q8IYH5 903 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 GPR156Q8NFN8 814 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CATSPER2Q96P56 530 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 RNF19AQ9NV58 838 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PTGFRNQ9P2B2 879 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ARHGAP28Q9P2N2 729 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 OGDHLQ9ULD0 1010 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TRIM66O15016 1216 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 IGSF6O95976 241 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CCNYL3P0C7X3 344 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 TPH1P17752 444 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ITGA8P53708 1063 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 OC90Q02509 493 aaPredicted RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 BST2Q10589 180 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 MEA1Q16626 185 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CYP2A13Q16696 494 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CRTC3Q6UUV7 619 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SYT12Q8IV01 421 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 FNDC5Q8NAU1 212 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 SLC35G2Q8TBE7 412 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 PRDM16Q9HAZ2 1276 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 KERAO60938 352 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 BCL10O95999 233 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 GNALP38405 381 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 NFKB2Q00653 900 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ARL6IP4Q66PJ3 421 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 ZCCHC2Q9C0B9 1178 aaKnown RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 COMMD8Q9NX08 183 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CES2O00748 559 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 RB1P06400 928 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 BNIP2Q12982 314 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 TBX2Q13207 712 aaPredicted RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 GPR135Q8IZ08 494 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 DPF2Q92785 391 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 LMLNQ96KR4 655 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 KCNK16Q96T55 309 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 SERPINB9P50453 376 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PER3P56645 1201 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 C7orf61Q8IZ16 206 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 IL17RAQ96F46 866 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 GAL3ST4Q96RP7 486 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 UBE2OQ9C0C9 1292 aaKnown RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 PLEKHA1Q9HB21 404 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ATP13A1Q9HD20 1204 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PCDH12Q9NPG4 1184 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 HCN3Q9P1Z3 774 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PSMC3IPQ9P2W1 217 aaPredicted RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 MRPS23Q9Y3D9 190 aaKnown RBP9.91□□□□□ -0.82
CHD3-202ENST00000358181 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 OVOS2A0A0J9YW53 1432 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 OVOS2Q6IE36 1432 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 THP07101 528 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 ANPEPP15144 967 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 CCNOP22674 350 aa9.91□□□□□ -0.82
CHD3-202ENST00000358181 PIGHQ14442 188 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms