RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 HPDLQ96IR7 371 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 CPB2Q96IY4 423 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 LENG8Q96PV6 779 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 BTBD9Q96Q07 612 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 GMLQ99445 158 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 C1orf21Q9H246 121 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 MRPL46Q9H2W6 279 aaKnown RBP8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 Q9H521 79 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 COPS7BQ9H9Q2 264 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 PNPLA8Q9NP80 782 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 EMCNQ9ULC0 261 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 PCDHA11Q9Y5I1 949 aa8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 HEMK1Q9Y5R4 338 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-201ENST00000357235 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM159BA6NKW6 160 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM189A1O60320 539 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 TNFAIP8O95379 198 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 IL1BP01584 269 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 COX4I1P13073 169 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 EPHA3P29320 983 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 NUP107P57740 925 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CXCL9Q07325 125 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FLOT2Q14254 428 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 TLR1Q15399 786 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 STILQ15468 1287 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 SLC9B1Q4ZJI4 515 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 BOLA3Q53S33 107 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM91A1Q658Y4 838 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 PMF1Q6P1K2 205 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CYP4V2Q6ZWL3 525 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDKL3Q8IVW4 592 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 PYROXD2Q8N2H3 581 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FBXW8Q8N3Y1 598 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM156AQ8NDB6 213 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CLEC4CQ8WTT0 213 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 MCRS1Q96EZ8 462 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDRT15Q96T59 188 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 PCYT2Q99447 389 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CENPOQ9BU64 300 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 MINDY3Q9H8M7 445 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 RBMX2Q9Y388 322 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ANKRD31Q8N7Z5 1873 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZBTB14O43829 449 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 PEX1O43933 1283 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 CILPO75339 1184 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 LCP1P13796 627 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 GLRBP48167 497 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ABCE1P61221 599 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 GHRHRQ02643 423 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 TUBB3Q13509 450 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 SURF1Q15526 300 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ARL13BQ3SXY8 428 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ANKDD1AQ495B1 522 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM160B1Q5W0V3 765 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 DCDC5Q6ZRR9 648 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF534Q76KX8 674 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM131BQ86XD5 332 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 DNAAF3Q8N9W5 541 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 COLGALT1Q8NBJ5 622 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 NACC2Q96BF6 587 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM149B1Q96BN6 582 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMA16Q96EY4 203 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 DCUN1D1Q96GG9 259 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 APOL2Q9BQE5 337 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 COPG2Q9UBF2 871 aa8.41□□□□□ -1.06
CDC42SE1-201ENST00000357235 STX16-NPEPL1H3BU86 382 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 GPR25O00155 361 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 KCNK1O00180 336 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 STAG3L1P0CL83 205 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 SRGAP2BP0DMP2 458 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 PABPC1P11940 636 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 TGM2P21980 687 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CCR10P46092 362 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 PDK2Q15119 407 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 NRF1Q16656 503 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 HSDL1Q3SXM5 330 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 C6orf52Q5T4I8 152 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 PLD6Q8N2A8 252 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 ACTRT2Q8TDY3 377 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 OR52B2Q96RD2 323 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 FRMD8Q9BZ67 464 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CEP44Q9C0F1 390 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 PAIP1Q9H074 479 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDT1Q9H211 546 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 LIN28AQ9H9Z2 209 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 SNX9Q9Y5X1 595 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CEPT1Q9Y6K0 416 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 BCLAF3A2AJT9 711 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRIM64CA6NLI5 447 aa8.4□□□□□ -1.06
CDC42SE1-201ENST00000357235 CCNT2O60583 730 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms