RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 F9P00740 461 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 ITGAVP06756 1048 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 ATXN1LP0C7T5 689 aaKnown RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CTSKP43235 329 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 NUMBP49757 651 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 STK19P49842 368 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CCR5P51681 352 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 RNASE9P60153 205 aaKnown RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 PITX1P78337 314 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 KRT83P78385 493 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 APBA1Q02410 837 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SCAPQ12770 1279 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CCDC157Q569K6 752 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 LRRC31Q6UY01 552 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SLC47A2Q86VL8 602 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CIR1Q86X95 450 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 C1orf131Q8NDD1 294 aaKnown RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SLC6A18Q96N87 628 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 FEM1AQ9BSK4 669 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 MUC3BQ9H195 1237 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 KDM4CQ9H3R0 1056 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 CCDC86Q9H6F5 360 aaKnown RBP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 GDF3Q9NR23 364 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPN3-204ENST00000356316 FTSJ1Q9UET6 329 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SERGEFQ9UGK8 458 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 STAP1Q9ULZ2 295 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 FREM2Q5SZK8 3169 aa10.97□□□□□ -0.65
CAPN3-204ENST00000356316 PLXNA2O75051 1894 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 C1QTNF3-AMACRE9PGA6 284 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 BNIP3LO60238 219 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 MAGEC1O60732 1142 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 PAGE1O75459 146 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ERBB2P04626 1255 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 CLCN1P35523 988 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 NUDT1P36639 197 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ADPRHP54922 357 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 CDH4P55283 916 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 IL9RQ01113 521 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 DLG2Q15700 870 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ACBD5Q5T8D3 534 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-204ENST00000356316 OLFML1Q6UWY5 402 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 SLC26A9Q7LBE3 791 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 TMPRSS7Q7RTY8 843 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 AADATQ8N5Z0 425 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 BAHD1Q8TBE0 780 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-204ENST00000356316 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 CCDC114Q96M63 670 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 ELF4Q99607 663 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-204ENST00000356316 TUBGCP2Q9BSJ2 902 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 PLCB1Q9NQ66 1216 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 BTBD3Q9Y2F9 522 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 HS3ST4Q9Y661 456 aa10.96□□□□□ -0.65
CAPN3-204ENST00000356316 A0A1B0GTQ1 180 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 TLR4O00206 839 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 MCF2LO15068 1137 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 YKT6O15498 198 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 SLC7A4O43246 635 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 ATP9BO43861 1147 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 DAB1O75553 588 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 LDOC1O95751 146 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 VAV1P15498 845 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 ERCC5P28715 1186 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 SULT1E1P49888 294 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 CENPCQ03188 943 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 DEUP1Q05D60 604 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 KCNJ12Q14500 433 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 STAT4Q14765 748 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 HSP90AA4PQ58FG1 418 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 KCNT1Q5JUK3 1230 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 BRMS1LQ5PSV4 323 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 CXorf57Q6NSI4 855 aaKnown RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 FAM71AQ8IYT1 594 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 OXR1Q8N573 874 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 ORAI3Q9BRQ5 295 aa10.95□□□□□ -0.66
CAPN3-204ENST00000356316 C2orf49Q9BVC5 232 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-204ENST00000356316 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms