RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ACKR2O00590 384 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 TRIM13O60858 407 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ATP6V1G1O75348 118 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SEC24DO94855 1032 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PENKP01210 267 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 THRAP10827 490 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PIM1P11309 404 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 CKMT2P17540 419 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PGAM1P18669 254 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 XIAPP98170 497 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SLC10A6Q3KNW5 377 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PIGGQ5H8A4 983 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 KRT27Q7Z3Y8 459 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF410Q86VK4 478 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 QKIQ96PU8 341 aaKnown RBP eCLIP10.34□□□□□ -0.755e-14■■■■■ 74.3
PTPRA-203ENST00000356147 TBCBQ99426 244 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 CIB1Q99828 191 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 NMRAL1Q9HBL8 299 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PTPRHQ9HD43 1115 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 BARX2Q9UMQ3 279 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ALDH1A2O94788 518 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PGK2P07205 417 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PTPRAP18433 802 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 TFEBP19484 476 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 GLDCP23378 1020 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 EMP3P54852 163 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SURF1Q15526 300 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 IER5Q5VY09 327 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ITPRIPL1Q6GPH6 555 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF280DQ6N043 979 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 LRRC8BQ6P9F7 803 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF280CQ8ND82 737 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 URGCPQ8TCY9 931 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ACMSDQ8TDX5 336 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 PDCD6IPQ8WUM4 868 aaKnown RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SLC39A3Q9BRY0 314 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 MRPS26Q9BYN8 205 aaKnown RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ILKAPQ9H0C8 392 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 CHRAC1Q9NRG0 131 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 IARS2Q9NSE4 1012 aaKnown RBP10.34□□□□□ -0.75
PTPRA-203ENST00000356147 ARHGEF38Q9NXL2 777 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 EPS15L1Q9UBC2 864 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 SNX13Q9Y5W8 968 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 CEPT1Q9Y6K0 416 aa10.34□□□□□ -0.75
PTPRA-203ENST00000356147 A0A087WZ62 844 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 VTNP04004 478 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 POLBP06746 335 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ALOX15P16050 662 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 PSMC3P17980 439 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ME2P23368 584 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 CNTFP26441 200 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 MAPK10P53779 464 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NME3Q13232 169 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SEL1L3Q68CR1 1132 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 LCLAT1Q6UWP7 414 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NUP93Q8N1F7 819 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SERPINI1Q99574 410 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 APBA2Q99767 749 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 FDXACB1Q9BRP7 624 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 STN1Q9H668 368 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 KLHL8Q9P2G9 620 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TLL2Q9Y6L7 1015 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 EVPLQ92817 2033 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NEMP2A6NFY4 417 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 GRID2O43424 1007 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TPST1O60507 370 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 VAPBO95292 243 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ATP5BP06576 529 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 HNRNPLP14866 589 aaKnown RBP eCLIP10.33□□□□□ -0.768e-8■■□□□ 13.5
PTPRA-203ENST00000356147 GRM1Q13255 1194 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ANKDD1AQ495B1 522 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TREML2Q5T2D2 321 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 STEAP4Q687X5 459 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 KLHL35Q6PF15 583 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TSPAN14Q8NG11 270 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 CXorf38Q8TB03 319 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SEPT1Q8WYJ6 367 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 APBB2Q92870 758 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms