RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 COPS7BQ9H9Q2 264 aaPredicted RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
COLCA1-201ENST00000355430 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 ACOT9Q9Y305 439 aa12.56□□□□□ -0.4
COLCA1-201ENST00000355430 MT-CO1P00395 513 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 TKTL1P51854 596 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 PTP4A2Q12974 167 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 FICDQ9BVA6 458 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 YIPF2Q9BWQ6 316 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 MRGBPQ9NV56 204 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 KCNK1O00180 336 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ERBB2P04626 1255 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CSHL1Q14406 222 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 FUT11Q495W5 492 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 NMUR2Q9GZQ4 415 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 MGEA5O60502 916 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 USP1O94782 785 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CCDC130P13994 396 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CDKN2BP42772 138 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 MRPS22P82650 360 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 AGKQ53H12 422 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ANGPTL8Q6UXH0 198 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ZSCAN18Q8TBC5 510 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 PRR5-ARHGAP8B1AHC4 643 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CYP1A1P04798 512 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CLTBP09497 229 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CCNHP51946 323 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 KCNK10P57789 538 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ARHGAP8P85298 464 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 PSMD5Q16401 504 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 RFWD3Q6PCD5 774 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 DAW1Q8N136 415 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 CLPTM1LQ96KA5 538 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 TMEM79Q9BSE2 394 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 NDUFS3O75489 264 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 MYO1DO94832 1006 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 SERPINA6P08185 405 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 GEMP55040 296 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 ADIGQ0VDE8 80 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 PLPP4Q5VZY2 271 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 TIGD7Q6NT04 549 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 SENP8Q96LD8 212 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
COLCA1-201ENST00000355430 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
COLCA1-201ENST00000355430 DPPA5A6NC42 116 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SPTLC1O15269 473 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PSMB4P28070 264 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ECHS1P30084 290 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ADSSP30520 456 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PTPN20Q4JDL3 420 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ZNF555Q8NEP9 628 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 AAR2Q9Y312 384 aaKnown RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 NR5A2O00482 541 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 NCAM2O15394 837 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 CSH1P0DML2 217 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 CSH2P0DML3 217 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PSMA4P25789 261 aaKnown RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 LBX1P52954 281 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 BLMHQ13867 455 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 POU6F1Q14863 301 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ADRM1Q16186 407 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SLC44A1Q8WWI5 657 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 FAR2Q96K12 515 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 MARK4Q96L34 752 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SPATA16Q9BXB7 569 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 NDUFS2O75306 463 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RHOAP61586 193 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 C6orf10Q5SRN2 563 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ADCK2Q7Z695 626 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 DEFB106AQ8N104 65 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ST6GALNAC4Q9H4F1 302 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SAC3D1A6NKF1 404 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms