RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TTC14Q96N46 770 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GCNAQ96QF7 691 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 WRNIP1Q96S55 665 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PAFAH2Q99487 392 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PAAF1Q9BRP4 392 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DPCDQ9BVM2 203 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 APOL6Q9BWW8 343 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM31Q9BZY9 425 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TKTL2Q9H0I9 626 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM5Q9Y2B1 443 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TRPV2Q9Y5S1 764 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IRAK3Q9Y616 596 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGEF12Q9NZN5 1544 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 UNC80Q8N2C7 3258 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TEX51A0A1B0GUA7 166 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TCRBV7S3A2A0A539 114 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 EFCAB8A8MWE9 144 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 RTCAO00442 366 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CTDSP2O14595 271 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NKX2-8O15522 239 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FOXS1O43638 330 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TSPAN3O60637 253 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FTCDO95954 541 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CYP2D6P10635 497 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CPT2P23786 658 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LRPAP1P30533 357 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ZEB1P37275 1124 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CLCN3P51790 818 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CLNS1AP54105 237 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NAP1L1P55209 391 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ABHD18Q0P651 414 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 AIMP1Q12904 312 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NFYCQ13952 458 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SCARB2Q14108 478 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KCNJ12Q14500 433 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CYP2A13Q16696 494 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KYNUQ16719 465 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LRRC8EQ6NSJ5 796 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KLHL35Q6PF15 583 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 DOK3Q7L591 496 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM83AQ86UY5 434 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 REXO1L1PQ8IX06 675 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 AVL9Q8NBF6 648 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 AGBL5Q8NDL9 886 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PIGSQ96S52 555 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NUDT22Q9BRQ3 303 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SIK2Q9H0K1 926 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SNTG1Q9NSN8 517 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM30AQ9NZY2 134 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 UPB1Q9UBR1 384 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CD207Q9UJ71 328 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NENFQ9UMX5 172 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CHST2Q9Y4C5 530 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ENTPD2Q9Y5L3 495 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ATAD2BQ9ULI0 1458 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 A0A0A0MQY5 61 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM90A8PA6NJQ4 464 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 QSOX1O00391 747 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CEP104O60308 925 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM90A13PP0C7W8 464 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM90A24PP0C7X0 464 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NR2F1P10589 423 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 GABRB1P18505 474 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 STAT6P42226 847 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 MTNR1AP48039 350 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 RARSP54136 660 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SLC37A1P57057 533 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 BYSLQ13895 437 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PSMD6Q15008 389 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NOXA1Q86UR1 476 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FUKQ8N0W3 1084 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KLHL36Q8N4N3 616 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 USP38Q8NB14 1042 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CNOT9Q92600 299 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ZDHHC12Q96GR4 267 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 GPR78Q96P69 363 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PPP1R10Q96QC0 940 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LMF1Q96S06 567 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PNKPQ96T60 521 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 AMBRA1Q9C0C7 1298 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SYNCQ9H7C4 482 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 USP29Q9HBJ7 922 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KCNK9Q9NPC2 374 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SNX15Q9NRS6 342 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 C20orf141Q9NUB4 165 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TRPM5Q9NZQ8 1165 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 KCND2Q9NZV8 630 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CNOT8Q9UFF9 292 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SLIT2O94813 1529 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 EHBP1L1Q8N3D4 1523 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ARAP3Q8WWN8 1544 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PRAMEF33A0A0G2JMD5 474 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TEX22C9J3V5 150 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM232C9JQI7 657 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LPXNO60711 386 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PRAMEF10O60809 474 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM20BO75063 409 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 GALTP07902 379 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 MC5RP33032 325 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms