RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 GMIPQ9P107 970 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 KATNA1O75449 491 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 PAGE1O75459 146 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 MMP8P22894 467 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 ITGA9Q13797 1035 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 PCID2Q5JVF3 399 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 SERPINA13PQ6UXR4 307 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 DBF4BQ8NFT6 615 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 PPP1R16AQ96I34 528 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 DPEP3Q9H4B8 488 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 STX18Q9P2W9 335 aaKnown RBP15.17■□□□□ 0.02
COL17A1-201ENST00000353479 NOL4O94818 638 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ABL2P42684 1182 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SLC35G1Q2M3R5 365 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 KBTBD12Q3ZCT8 623 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 PRELID2Q8N945 189 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 MLPHQ9BV36 600 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 E9PBE3 544 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 KLHL41O60662 606 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SEC24DO94855 1032 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 CDC25CP30307 473 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ZNF844Q08AG5 666 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SMARCB1Q12824 385 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 VSTM1Q6UX27 236 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 FBXO39Q8N4B4 442 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SCLYQ96I15 445 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 OMDQ99983 421 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 TLE6Q9H808 572 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 GNG14A0A1W2PPG7 69 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 MDM4O15151 490 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 EEF1DP29692 281 aaKnown RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 CFAP52Q8N1V2 620 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 BCAS3Q9H6U6 928 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 NMRAL1Q9HBL8 299 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 RAD51BO15315 384 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 MAPK1P28482 360 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ATP6V1E1P36543 226 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 LILRA4P59901 499 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 CDC16Q13042 620 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SLC10A6Q3KNW5 377 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 CERS4Q9HA82 394 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 CCL16O15467 120 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SLC5A3P53794 718 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 TP53BP2Q13625 1128 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 PGS1Q32NB8 556 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 AENQ8WTP8 325 aaKnown RBP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 APOPT1Q96IL0 206 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL17A1-201ENST00000353479 PCYOX1Q9UHG3 505 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 RAB21Q9UL25 225 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
COL17A1-201ENST00000353479 ITGAVP06756 1048 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 CCDC153Q494R4 210 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 BRMS1LQ5PSV4 323 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 CLEC4FQ8N1N0 589 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 LRRC39Q96DD0 335 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 TMEM120AQ9BXJ8 343 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 FZD8Q9H461 694 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 SRRDQ9UH36 339 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 FAM50BQ9Y247 325 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 H3BQF6 201 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 BTN3A1O00481 513 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 TFE3P19532 575 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-201ENST00000353479 MAPK9P45984 424 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 PCDH18Q9HCL0 1135 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 BPIFA1Q9NP55 256 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 UNCXA6NJT0 531 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 GPC1P35052 558 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 PRIM2P49643 509 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 AASDHQ4L235 1098 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-201ENST00000353479 GPR158Q5T848 1215 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 SUGP1Q8IWZ8 645 aaKnown RBP15.15■□□□□ 0.02
COL17A1-201ENST00000353479 RSPH1Q8WYR4 309 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 PANX3Q96QZ0 392 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 LRRC19Q9H756 370 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 CFAP97Q9P2B7 532 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 ARHGAP26Q9UNA1 814 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 REXO2Q9Y3B8 237 aaKnown RBP15.15■□□□□ 0.02
COL17A1-201ENST00000353479 MGAT4DA6NG13 374 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 PHGDHO43175 533 aaKnown RBP15.15■□□□□ 0.02
COL17A1-201ENST00000353479 ADSSP30520 456 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 TRAPPC5Q8IUR0 188 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 EME1Q96AY2 570 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 MFSD1Q9H3U5 465 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 ATP13A3Q9H7F0 1226 aa15.15■□□□□ 0.02
COL17A1-201ENST00000353479 HNRNPCL2B2RXH8 293 aa15.14■□□□□ 0.01
COL17A1-201ENST00000353479 M0R2N6 131 aa15.14■□□□□ 0.01
COL17A1-201ENST00000353479 FLT3P36888 993 aa15.14■□□□□ 0.01
COL17A1-201ENST00000353479 NAT16Q8N8M0 369 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms