RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF333Q96JL9 665 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SERAC1Q96JX3 654 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 BTN2A3PQ96KV6 586 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 FCRL5Q96RD9 977 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 HERC2P3Q9BVR0 1158 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CEP41Q9BYV8 373 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 UBE2OQ9C0C9 1292 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TMEM248Q9NWD8 314 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MKS1Q9NXB0 559 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MARCH2Q9P0N8 246 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SEPT10Q9P0V9 454 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 AFF4Q9UHB7 1163 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SLC27A5Q9Y2P5 690 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MAD1L1Q9Y6D9 718 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TANC1Q9C0D5 1861 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CACNA1GO43497 2377 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TCP11X1B4DZS4 312 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 AP3B1O00203 1094 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SNX3O60493 162 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 UGT1A9O60656 530 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 RFPL1O75677 317 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 KRT37O76014 449 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 TBX18O95935 607 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 JCHAINP01591 159 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MT-ND3P03897 115 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SOD2P04179 222 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SNRPAP09012 282 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ALADP13716 330 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CCNB1P14635 433 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 HMGA1P17096 107 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CNTFP26441 200 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 RPA3P35244 121 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ADRA1AP35348 466 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ETV4P43268 484 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 NPY2RP49146 381 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 TUFMP49411 452 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ALDH7A1P49419 539 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SERPINB9P50453 376 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 KPNA1P52294 538 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 NDST2P52849 883 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ARPP19P56211 112 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CORO7P57737 925 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 DSG1Q02413 1049 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MGAT5Q09328 741 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 EFEMP1Q12805 493 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 DNAJC3Q13217 504 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ITIH4Q14624 930 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CRYMQ14894 314 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 PSMD5Q16401 504 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 PDK4Q16654 411 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SPANXN3Q5MJ09 141 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 LGSNQ5TDP6 509 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 GKAP1Q5VSY0 366 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ARMC3Q5W041 872 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 TIGD7Q6NT04 549 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 FBXL22Q6P050 247 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 KLHDC10Q6PID8 442 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CPLX4Q7Z7G2 160 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SRLQ86TD4 932 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CCDC117Q8IWD4 279 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 GPR65Q8IYL9 337 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CMTR2Q8IYT2 770 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CACNA2D3Q8IZS8 1091 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ATPAF2Q8N5M1 289 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ANKLE1Q8NAG6 615 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 OR52K1Q8NGK4 314 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 GPR152Q8TDT2 470 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 DIS3LQ8TF46 1054 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MTBPQ96DY7 904 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 APOPT1Q96IL0 206 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MYRFLQ96LU7 910 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 AGAP3Q96P47 875 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 PPP1R2P1Q96PQ5 205 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SEPT5Q99719 369 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CLSTN3Q9BQT9 956 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 ZYG11BQ9C0D3 744 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 FAM107BQ9H098 131 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 NSRP1Q9H0G5 558 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 RETREG1Q9H6L5 497 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 LRRC40Q9H9A6 602 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 UGT1A7Q9HAW7 530 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 UGT1A10Q9HAW8 530 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 UGT1A8Q9HAW9 530 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 GLOD4Q9HC38 313 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MLXIPLQ9NP71 852 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 NDFIP2Q9NV92 336 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 SYBUQ9NX95 663 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 DONSONQ9NYP3 566 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 MPP6Q9NZW5 540 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 GRID1Q9ULK0 1009 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 VANGL2Q9ULK5 521 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 RRP15Q9Y3B9 282 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 HBS1LQ9Y450 684 aaKnown RBP7.07□□□□□ -1.28
TRIM55-203ENST00000350034 CDY1Q9Y6F8 540 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms