RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 USH1CQ9Y6N9 552 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 CDH23Q9H251 3354 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 KDSRQ06136 332 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 GRIK3Q13003 919 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 CTBP1Q13363 440 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 E2F7Q96AV8 911 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 PIDD1Q9HB75 910 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 ARHGEF3Q9NR81 526 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.149e-6■□□□□ 9.6
TRIM4-201ENST00000349062 OSER1Q9NX31 292 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 DCLK1O15075 740 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 INHAP05111 366 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 RPL9P32969 192 aaKnown RBP14.19□□□□□ -0.14
TRIM4-201ENST00000349062 FDFT1P37268 417 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 DUSP4Q13115 394 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 SEMA5AQ13591 1074 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 URGCPQ8TCY9 931 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 KCTD13Q8WZ19 329 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 SLC2A13Q96QE2 648 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 ACBD6Q9BR61 282 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 FSD1LQ9BXM9 530 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 C5orf42Q9H799 3197 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 RANBP2P49792 3224 aaKnown RBP14.19□□□□□ -0.14
TRIM4-201ENST00000349062 HHLA1C9JL84 531 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 RFPL1O75677 317 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 IRF1P10914 325 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 NMBRP28336 390 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 DPYSQ14117 519 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 PARP6Q2NL67 630 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 RAP1GAP2Q684P5 730 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 ACVR1CQ8NER5 493 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 MZB1Q8WU39 189 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 OLFM3Q96PB7 478 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 NT5MQ9NPB1 228 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 TXLNGQ9NUQ3 528 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 NUMBLQ9Y6R0 609 aa14.19□□□□□ -0.14
TRIM4-201ENST00000349062 UNC5CO95185 931 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 DNAJB2P25686 324 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 CD68P34810 354 aaPredicted RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 MGAT3Q09327 533 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 DEFB115Q30KQ5 88 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 PACS1Q6VY07 963 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 LDB1Q86U70 411 aaPredicted RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 SH3GL3Q99963 347 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 SPON2Q9BUD6 331 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 HMX2A2RU54 273 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 GJB3O75712 270 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 LUC7L3O95232 432 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 VAPBO95292 243 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 ENO1P06733 434 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 LINGO3P0C6S8 592 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 GARSP41250 739 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 IRF9Q00978 393 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 RBBP5Q15291 538 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 VARS2Q5ST30 1063 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 SLC30A9Q6PML9 568 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 PSTKQ8IV42 348 aaKnown RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 OXNAD1Q96HP4 312 aaPredicted RBP14.18□□□□□ -0.14
TRIM4-201ENST00000349062 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 SLC39A8Q9C0K1 460 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 PTCH2Q9Y6C5 1203 aa14.18□□□□□ -0.14
TRIM4-201ENST00000349062 SLC12A8A0AV02 714 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TBKBP1A7MCY6 615 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CNTN5O94779 1100 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CCNB1P14635 433 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CCR1P32246 355 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 AQP5P55064 265 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 FASTKD1Q53R41 847 aaKnown RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 DCLRE1AQ6PJP8 1040 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SLC24A5Q71RS6 500 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TMEM173Q86WV6 379 aaPredicted RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 ARNTL2Q8WYA1 636 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 ACTL7AQ9Y615 435 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 UNC80Q8N2C7 3258 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 ITGA2BP08514 1039 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 BLMHQ13867 455 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TSNAXIP1Q2TAA8 658 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 VWA5B1Q5TIE3 1220 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 RNF220Q5VTB9 566 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 RFWD3Q6PCD5 774 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 C4orf50Q6ZRC1 276 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 UTP4Q969X6 686 aaKnown RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CERS2Q96G23 380 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 EXOC2Q96KP1 924 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 MLPHQ9BV36 600 aaPredicted RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SPAG6O75602 509 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 PRKCGP05129 697 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SERPINB6P35237 376 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 GALNTL6Q49A17 601 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 TEX44Q53QW1 395 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms