RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 STX16-NPEPL1H3BU86 382 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CCL22O00626 93 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MSI1O43347 362 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CTSHP09668 335 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 BMP1P13497 986 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MAGEA12P43365 314 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 NR2C2P49116 596 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DAOAP59103 153 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TRIM32Q13049 653 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MSLNQ13421 630 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 PPP2R5DQ14738 602 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GRM3Q14832 879 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TIGD5Q53EQ6 642 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TCHHL1Q5QJ38 904 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 IL31Q6EBC2 164 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 OR52E8Q6IFG1 317 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 AGMOQ6ZNB7 445 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 LRRC74BQ6ZQY2 392 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 STRA8Q7Z7C7 330 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CLEC14AQ86T13 490 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TMEM135Q86UB9 458 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TLK2Q86UE8 772 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MYLK4Q86YV6 388 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 HS6ST3Q8IZP7 471 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 LSMEM2Q8N112 164 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 HIPK4Q8NE63 616 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CERS2Q96G23 380 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 RILPQ96NA2 401 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 OMDQ99983 421 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SNX25Q9H3E2 840 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DCLRE1BQ9H816 532 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 COG4Q9H9E3 785 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 UBQLN1Q9UMX0 589 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 G3BP2Q9UN86 482 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SMIM35A0A1B0GVV1 85 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 E9PBE3 544 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 EEF2KO00418 725 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 KLHL41O60662 606 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 LRIG2O94898 1065 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 OR4Q2P0C623 313 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CYP2B6P20813 491 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SAT1P21673 171 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 MPSTP25325 297 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TAF6P49848 677 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RAP1GDS1P52306 607 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 MPP1Q00013 466 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DEUP1Q05D60 604 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CTBP1Q13363 440 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 GK3PQ14409 553 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SDHAF4Q5VUM1 108 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 FAM91A1Q658Y4 838 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DENND5AQ6IQ26 1287 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CCNJLQ8IV13 435 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 OR10T2Q8NGX3 314 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 FAM110BQ8TC76 370 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DNAJC9Q8WXX5 260 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF669Q96BR6 464 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 MYEOVQ96EZ4 313 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SENP8Q96LD8 212 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ABHD16BQ9H3Z7 469 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CYP4F11Q9HBI6 524 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 THAP1Q9NVV9 213 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 GMPR2Q9P2T1 348 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SFMBT1Q9UHJ3 866 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DERAQ9Y315 318 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 AK5Q9Y6K8 562 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 NEMP2A6NFY4 417 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DCXO43602 365 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DAB1O75553 588 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SPAG6O75602 509 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 KRT38O76015 456 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TM7SF2O76062 418 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 STK10O94804 968 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 AHSGP02765 367 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 MYL3P08590 195 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SETSIPP0DME0 302 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SRGAP2BP0DMP2 458 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 PGAM1P18669 254 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ITGAXP20702 1163 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 KCNA5P22460 613 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 WARSP23381 471 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 NOS2P35228 1153 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SCNN1GP51170 649 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ATXN3P54252 364 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SLC8A3P57103 927 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SLC34A1Q06495 639 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 EIF4EBP2Q13542 120 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ANKRD20A4Q4UJ75 823 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SFT2D3Q587I9 215 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RAB41Q5JT25 222 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 MORN1Q5T089 497 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CST9Q5W186 159 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ARCQ7LC44 396 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 C14orf80Q86SX3 495 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 NT5DC4Q86YG4 428 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SCUBE1Q8IWY4 988 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CENPLQ8N0S6 344 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms