RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 JUNP05412 331 aaKnown RBP12.09□□□□□ -0.47
APP-201ENST00000346798 SPATA31D3P0C874 917 aa12.09□□□□□ -0.47
APP-201ENST00000346798 THOP1P52888 689 aa12.09□□□□□ -0.47
APP-201ENST00000346798 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
APP-201ENST00000346798 FLOT2Q14254 428 aa12.09□□□□□ -0.47
APP-201ENST00000346798 FBXO47Q5MNV8 452 aa12.09□□□□□ -0.47
APP-201ENST00000346798 PGM2L1Q6PCE3 622 aa12.09□□□□□ -0.47
APP-201ENST00000346798 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
APP-201ENST00000346798 SPATA31D4Q6ZUB0 917 aa12.09□□□□□ -0.47
APP-201ENST00000346798 SIX6OS1Q8N1H7 587 aa12.09□□□□□ -0.47
APP-201ENST00000346798 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
APP-201ENST00000346798 VCX3BQ9H321 246 aa12.09□□□□□ -0.47
APP-201ENST00000346798 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
APP-201ENST00000346798 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
APP-201ENST00000346798 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
APP-201ENST00000346798 ARSAP15289 507 aa12.09□□□□□ -0.47
APP-201ENST00000346798 ERCC2P18074 760 aa12.09□□□□□ -0.47
APP-201ENST00000346798 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
APP-201ENST00000346798 PIK3R1P27986 724 aa12.09□□□□□ -0.47
APP-201ENST00000346798 PMLP29590 882 aa12.09□□□□□ -0.47
APP-201ENST00000346798 NUMBP49757 651 aa12.09□□□□□ -0.47
APP-201ENST00000346798 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
APP-201ENST00000346798 MPP3Q13368 585 aa12.09□□□□□ -0.47
APP-201ENST00000346798 C9orf57Q5W0N0 161 aa12.09□□□□□ -0.47
APP-201ENST00000346798 KCNMB4Q86W47 210 aa12.09□□□□□ -0.47
APP-201ENST00000346798 PNPLA1Q8N8W4 532 aa12.09□□□□□ -0.47
APP-201ENST00000346798 LRGUKQ96M69 825 aa12.09□□□□□ -0.47
APP-201ENST00000346798 KCNK16Q96T55 309 aa12.09□□□□□ -0.47
APP-201ENST00000346798 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
APP-201ENST00000346798 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
APP-201ENST00000346798 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
APP-201ENST00000346798 TLK1Q9UKI8 766 aa12.09□□□□□ -0.47
APP-201ENST00000346798 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
APP-201ENST00000346798 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
APP-201ENST00000346798 C15orf38-AP3S2A0A0A6YYH1 394 aa12.09□□□□□ -0.47
APP-201ENST00000346798 KPNA7A9QM74 516 aa12.09□□□□□ -0.47
APP-201ENST00000346798 FZD9O00144 591 aa12.09□□□□□ -0.47
APP-201ENST00000346798 GRIA4P48058 902 aa12.09□□□□□ -0.47
APP-201ENST00000346798 HARS2P49590 506 aaKnown RBP12.09□□□□□ -0.47
APP-201ENST00000346798 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
APP-201ENST00000346798 GRIK4Q16099 956 aa12.09□□□□□ -0.47
APP-201ENST00000346798 LSM12Q3MHD2 195 aaKnown RBP12.09□□□□□ -0.47
APP-201ENST00000346798 GRTP1Q5TC63 336 aa12.09□□□□□ -0.47
APP-201ENST00000346798 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
APP-201ENST00000346798 ARPINQ7Z6K5 226 aa12.09□□□□□ -0.47
APP-201ENST00000346798 TTC39CQ8N584 583 aa12.09□□□□□ -0.47
APP-201ENST00000346798 RNF169Q8NCN4 708 aa12.09□□□□□ -0.47
APP-201ENST00000346798 KCTD4Q8WVF5 259 aa12.09□□□□□ -0.47
APP-201ENST00000346798 KBTBD7Q8WVZ9 684 aa12.09□□□□□ -0.47
APP-201ENST00000346798 EDEM1Q92611 657 aa12.09□□□□□ -0.47
APP-201ENST00000346798 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
APP-201ENST00000346798 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
APP-201ENST00000346798 G3V2L1 256 aa12.08□□□□□ -0.48
APP-201ENST00000346798 MT-CO1P00395 513 aa12.08□□□□□ -0.48
APP-201ENST00000346798 MLNP12872 115 aa12.08□□□□□ -0.48
APP-201ENST00000346798 NELFEP18615 380 aaKnown RBP12.08□□□□□ -0.48
APP-201ENST00000346798 NMBRP28336 390 aa12.08□□□□□ -0.48
APP-201ENST00000346798 TPI1P60174 286 aa12.08□□□□□ -0.48
APP-201ENST00000346798 GRM3Q14832 879 aa12.08□□□□□ -0.48
APP-201ENST00000346798 TLR1Q15399 786 aa12.08□□□□□ -0.48
APP-201ENST00000346798 FAM187BQ17R55 369 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ANKRD20A4Q4UJ75 823 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ARL13AQ5H913 290 aaPredicted RBP12.08□□□□□ -0.48
APP-201ENST00000346798 SPATA24Q86W54 205 aa12.08□□□□□ -0.48
APP-201ENST00000346798 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
APP-201ENST00000346798 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
APP-201ENST00000346798 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
APP-201ENST00000346798 CENPIQ92674 756 aaPredicted RBP12.08□□□□□ -0.48
APP-201ENST00000346798 SIKE1Q9BRV8 207 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ACE2Q9BYF1 805 aaPredicted RBP12.08□□□□□ -0.48
APP-201ENST00000346798 ETAA1Q9NY74 926 aa12.08□□□□□ -0.48
APP-201ENST00000346798 H3BNX3 289 aa12.08□□□□□ -0.48
APP-201ENST00000346798 JCHAINP01591 159 aa12.08□□□□□ -0.48
APP-201ENST00000346798 NFKB1P19838 968 aa12.08□□□□□ -0.48
APP-201ENST00000346798 PTPN3P26045 913 aa12.08□□□□□ -0.48
APP-201ENST00000346798 GRM5P41594 1212 aa12.08□□□□□ -0.48
APP-201ENST00000346798 CDK18Q07002 472 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ART3Q13508 389 aa12.08□□□□□ -0.48
APP-201ENST00000346798 SLC25A52Q3SY17 297 aa12.08□□□□□ -0.48
APP-201ENST00000346798 CCDC153Q494R4 210 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ZDHHC17Q8IUH5 632 aa12.08□□□□□ -0.48
APP-201ENST00000346798 DSELQ8IZU8 1212 aa12.08□□□□□ -0.48
APP-201ENST00000346798 BHLHE22Q8NFJ8 381 aaPredicted RBP12.08□□□□□ -0.48
APP-201ENST00000346798 DCUN1D1Q96GG9 259 aa12.08□□□□□ -0.48
APP-201ENST00000346798 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
APP-201ENST00000346798 NPAS2Q99743 824 aa12.08□□□□□ -0.48
APP-201ENST00000346798 GORASP1Q9BQQ3 440 aa12.08□□□□□ -0.48
APP-201ENST00000346798 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
APP-201ENST00000346798 ANLNQ9NQW6 1124 aa12.08□□□□□ -0.48
APP-201ENST00000346798 DNAJB4Q9UDY4 337 aa12.08□□□□□ -0.48
APP-201ENST00000346798 RUVBL2Q9Y230 463 aaKnown RBP12.08□□□□□ -0.48
APP-201ENST00000346798 PIN4Q9Y237 131 aaKnown RBP12.08□□□□□ -0.48
APP-201ENST00000346798 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
APP-201ENST00000346798 HACD1B0YJ81 288 aa12.07□□□□□ -0.48
APP-201ENST00000346798 HOXA11P31270 313 aaPredicted RBP12.07□□□□□ -0.48
APP-201ENST00000346798 LIMK2P53671 638 aa12.07□□□□□ -0.48
APP-201ENST00000346798 MTTPP55157 894 aa12.07□□□□□ -0.48
APP-201ENST00000346798 CTBP1Q13363 440 aa12.07□□□□□ -0.48
APP-201ENST00000346798 NOL9Q5SY16 702 aaKnown RBP12.07□□□□□ -0.48
APP-201ENST00000346798 SEL1L3Q68CR1 1132 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms