RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CHMP2BQ9UQN3 213 aa9.49□□□□□ -0.89
ATG4A-202ENST00000345734 PCDHB5Q9Y5E4 795 aa9.49□□□□□ -0.89
ATG4A-202ENST00000345734 SF3B1O75533 1304 aaKnown RBP eCLIP9.48□□□□□ -0.893e-8■■■■■ 315.9
ATG4A-202ENST00000345734 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 E7EVH7 732 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 IRAK2O43187 625 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 LRIG2O94898 1065 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 VNN2O95498 520 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 CHN1P15882 459 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ELK3P41970 407 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 SEC24CP53992 1094 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 PDK1Q15118 436 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 TMED2Q15363 201 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ANKRD20A2Q5SQ80 823 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ANKRD20A1Q5TYW2 823 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ANKRD20A3Q5VUR7 823 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ZNF280DQ6N043 979 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 VSTM1Q6UX27 236 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 ARHGEF18Q6ZSZ5 1173 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 DENND5BQ6ZUT9 1274 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 BEND5Q7L4P6 421 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 CAND1Q86VP6 1230 aaKnown RBP9.48□□□□□ -0.89
ATG4A-202ENST00000345734 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 CCNYQ8ND76 341 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 VWCEQ96DN2 955 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 P2RY11Q96G91 374 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 FUBP3Q96I24 572 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATG4A-202ENST00000345734 STMN4Q9H169 189 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-202ENST00000345734 CRISPLD1Q9H336 500 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 BRD7Q9NPI1 651 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 PPANQ9NQ55 473 aaKnown RBP9.48□□□□□ -0.89
ATG4A-202ENST00000345734 SEPT10Q9P0V9 454 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 LGALS13Q9UHV8 139 aa9.48□□□□□ -0.89
ATG4A-202ENST00000345734 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
ATG4A-202ENST00000345734 OR6C75A6NL08 312 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 RNF103O00237 685 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 EREGO14944 169 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 COQ9O75208 318 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 CDH16O75309 829 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 SRGAP2BP0DMP2 458 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 MAGEA6P43360 314 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 HCAR3P49019 387 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 PRSS55Q6UWB4 352 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-202ENST00000345734 C3orf62Q6ZUJ4 267 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 BZW1Q7L1Q6 419 aaKnown RBP9.47□□□□□ -0.89
ATG4A-202ENST00000345734 PALM2Q8IXS6 379 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 VPS52Q8N1B4 723 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 DEPDC1BQ8WUY9 529 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 C8orf48Q96LL4 319 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TMEM175Q9BSA9 504 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 SIK2Q9H0K1 926 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 SMOC2Q9H3U7 446 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 CNOT10Q9H9A5 744 aaKnown RBP9.47□□□□□ -0.89
ATG4A-202ENST00000345734 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 GMIPQ9P107 970 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 ATP11BQ9Y2G3 1177 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TEX264Q9Y6I9 313 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 MTMR11A4FU01 709 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 A6NNZ2 444 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TBC1D4O60343 1298 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 PAGE1O75459 146 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 CPB1P15086 417 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 EPHB2P29323 1055 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 GRIA1P42261 906 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 GLUD2P49448 558 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 WASHC5Q12768 1159 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 PPP1R21Q6ZMI0 780 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 ZNF534Q76KX8 674 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 TMCO2Q7Z6W1 182 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-202ENST00000345734 LRRC43Q8N309 656 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 BCAS4Q8TDM0 211 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 MAML1Q92585 1016 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 SPATA13Q96N96 652 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 MRPL9Q9BYD2 267 aaKnown RBP9.47□□□□□ -0.89
ATG4A-202ENST00000345734 EPN3Q9H201 632 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 NEU3Q9UQ49 428 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
ATG4A-202ENST00000345734 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 KCNK1O00180 336 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 ADAM12O43184 909 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 MAGEA11P43364 429 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 DUSP4Q13115 394 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 GPR17Q13304 367 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 SEMA5AQ13591 1074 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 GRIN2CQ14957 1233 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 MGAT5BQ3V5L5 792 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 ARTNQ5T4W7 220 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 RWDD4Q6NW29 188 aaKnown RBP9.46□□□□□ -0.89
ATG4A-202ENST00000345734 TAOK1Q7L7X3 1001 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 MON1AQ86VX9 555 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 ZNF567Q8N184 647 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.89
ATG4A-202ENST00000345734 COLGALT1Q8NBJ5 622 aa9.46□□□□□ -0.89
ATG4A-202ENST00000345734 MCUQ8NE86 351 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms