RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 AGR3Q8TD06 166 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 DQX1Q8TE96 717 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 HDAC11Q96DB2 347 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 RBBP8Q99708 897 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 CASS4Q9NQ75 786 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 COPG2Q9UBF2 871 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 Q9Y3F1 56 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 SERPINE1P05121 402 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 SERPINB6P35237 376 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 CXCR3P49682 368 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 VWA5B1Q5TIE3 1220 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 KCNMB4Q86W47 210 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 PPP4R1Q8TF05 950 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 FAM167BQ9BTA0 163 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 SHCBP1LQ9BZQ2 653 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 SPECC1L-ADORA2AF8WAN1 911 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 NCAM2O15394 837 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 MSI1O43347 362 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 F9P00740 461 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 NMBRP28336 390 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 CTGFP29279 349 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 IRF5Q13568 498 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 KCTD11Q693B1 232 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 C17orf99Q6UX52 265 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 TMEM135Q86UB9 458 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 LRRTM3Q86VH5 581 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 POU5F2Q8N7G0 328 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 ENDOVQ8N8Q3 282 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 OR10T2Q8NGX3 314 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 PGAP3Q96FM1 320 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 DCLRE1BQ9H816 532 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 TAGLN3Q9UI15 199 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 PADI3Q9ULW8 664 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 GIT1Q9Y2X7 761 aa15.2■□□□□ 0.02
VIPAS39-202ENST00000343765 A0A096LPK6 155 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 ITGB1P05556 798 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 FAM163BP0C2L3 166 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 RALBP11234 206 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 CPA3P15088 417 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 PGFP49763 221 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 SERPINB8P50452 374 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 LIMK2P53671 638 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 THOC5Q13769 683 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 ITPRIPL1Q6GPH6 555 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 MAVSQ7Z434 540 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 KDELC2Q7Z4H8 507 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 METTL23Q86XA0 190 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 RASAL3Q86YV0 1011 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 MOCOSQ96EN8 888 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 THTPAQ9BU02 230 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 CCDC106Q9BWC9 280 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 YY1AP1Q9H869 796 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 CPSF2Q9P2I0 782 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 SFMBT1Q9UHJ3 866 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 USP1O94782 785 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 MT-CYBP00156 380 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 HCAR3P49019 387 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 INTS6LQ5JSJ4 861 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 STXBP5Q5T5C0 1151 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 TEKT5Q96M29 485 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 SORT1Q99523 831 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 DMAP1Q9NPF5 467 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 MOCS2O96007 188 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 SERPINA6P08185 405 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 MPP3Q13368 585 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 CNTD1Q8N815 330 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 STMN2Q93045 179 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 SLC39A10Q9ULF5 831 aa15.19■□□□□ 0.02
VIPAS39-202ENST00000343765 GPR182O15218 404 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 OR4Q2P0C623 313 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 RPL9P32969 192 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 AVPR1AP37288 418 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 USP4Q13107 963 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 TMPRSS6Q8IU80 811 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 SOCS4Q8WXH5 440 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 CHST12Q9NRB3 414 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 RRN3Q9NYV6 651 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 APOBEC2Q9Y235 224 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 RAD54BQ9Y620 910 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 MTSS1O43312 755 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 CAPN15O75808 1086 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 ABCE1P61221 599 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 TRIM32Q13049 653 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 POU6F1Q14863 301 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 RAPH1Q70E73 1250 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 SERINC5Q86VE9 423 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 IPMKQ8NFU5 416 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 ZNF419Q96HQ0 510 aaPredicted RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 ARHGAP39Q9C0H5 1083 aa15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 RPL26L1Q9UNX3 145 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-202ENST00000343765 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 C2P06681 752 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 CCNG1P51959 295 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms