RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 V9GYQ6 96 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 GAKO14976 1311 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 LINGO3P0C6S8 592 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 RAB10P61026 200 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TAF5Q15542 800 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 DCAF4L1Q3SXM0 396 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TIMM50Q3ZCQ8 353 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ZACNQ401N2 412 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 BBS12Q6ZW61 710 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ZBTB8BQ8NAP8 495 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ITFG1Q8TB96 612 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NR2E1Q9Y466 385 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TMEM191CA6NGB0 347 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PEX1O43933 1283 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KCNH1O95259 989 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TPSB2P20231 275 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SOX11P35716 441 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TP53BP2Q13625 1128 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TPSAB1Q15661 275 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 C6orf52Q5T4I8 152 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ATAD3BQ5T9A4 648 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NOTUMQ6P988 496 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TMC7Q7Z402 723 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 STK32CQ86UX6 486 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TTLL6Q8N841 843 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CYP4F12Q9HCS2 524 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SLC38A7Q9NVC3 462 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TBC1D13Q9NVG8 400 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SAGE2PA6NJ88 616 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 HNRNPCL2B2RXH8 293 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TAS2R40P59535 323 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MTA1Q13330 715 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SNX31Q8N9S9 440 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 LEMD2Q8NC56 503 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 C17orf50Q8WW18 174 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CPT1BQ92523 772 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ROPN1LQ96C74 230 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MRPL57Q9BQC6 102 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 IDI2Q9BXS1 227 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ACE2Q9BYF1 805 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 DNAAF2Q9NVR5 837 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KCPQ6ZWJ8 1503 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TAF4O00268 1085 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PMM2O15305 246 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 BANF1O75531 89 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 CSPG5O95196 566 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SLC2A3P11169 496 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 HOXB8P17481 243 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 AOC1P19801 751 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 KLRC2P26717 231 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PEX2P28328 305 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 POLD2P49005 469 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 KCTD21Q4G0X4 260 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TJAP1Q5JTD0 557 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 FAM45BPQ6NSW5 357 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 C15orf52Q6ZUT6 534 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 RRM2BQ7LG56 351 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ACOT1Q86TX2 421 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ZC3H3Q8IXZ2 948 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 AMER2Q8N7J2 671 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 DGCR6LQ9BY27 220 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 AP5M1Q9H0R1 490 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 NOL11Q9H8H0 719 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 POLLQ9UGP5 575 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 GPC6Q9Y625 555 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PTGES3LE9PB15 166 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 AVILO75366 819 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 GLP2RO95838 553 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ADRB2P07550 413 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 MSH3P20585 1137 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PCSK1P29120 753 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SERPINH1P50454 418 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 NAGLUP54802 743 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 FKBP1AP62942 108 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SPIDRQ14159 915 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PPP4R4Q6NUP7 873 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 C16orf46Q6P387 395 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 OLFML1Q6UWY5 402 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TBC1D21Q8IYX1 336 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 CNTD1Q8N815 330 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 CHST13Q8NET6 341 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 KAT5Q92993 513 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TOP1MTQ969P6 601 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PHF21BQ96EK2 531 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 TRMOQ9BU70 441 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 RNPEPQ9H4A4 650 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 VTA1Q9NP79 307 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 DKK3Q9UBP4 350 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 NUDT5Q9UKK9 219 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 VAV3Q9UKW4 847 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 DOCK2Q92608 1830 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PLCH1Q4KWH8 1693 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ANKRD63C9JTQ0 380 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 OAS1P00973 400 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 GALK1P51570 392 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 CSE1LP55060 971 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ARMC4Q5T2S8 1044 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 NEK10Q6ZWH5 1172 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms