RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 FEZF2Q8TBJ5 459 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 C9orf72Q96LT7 481 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TDRKHQ9Y2W6 561 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ASXL3Q9C0F0 2248 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PAX3P23760 479 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 FBXO31Q5XUX0 539 aaPredicted RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF285Q96NJ3 590 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF607Q96SK3 696 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 HEATR1Q9H583 2144 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 USP17L10C9JJH3 530 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 F9P00740 461 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 EPHB2P29323 1055 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PTPRNQ16849 979 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 INSCQ1MX18 579 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 GJD3Q8N144 294 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 CD248Q9HCU0 757 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 GSTT2BP0CG30 244 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 RGS7P49802 495 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TCHHL1Q5QJ38 904 aaPredicted RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 JAMLQ86YT9 394 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ARL5AQ9Y689 179 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 A2MP01023 1474 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 DDX3XO00571 662 aaKnown RBP eCLIP17.9■□□□□ 0.462e-13■□□□□ 10.8
SMAD4-201ENST00000342988 SLC34A1Q06495 639 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 A0A087WZ62 844 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 TMPRSS11AQ6ZMR5 421 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 INTS10Q9NVR2 710 aaKnown RBP17.9■□□□□ 0.46
SMAD4-201ENST00000342988 AP4E1Q9UPM8 1137 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 STAG3L1P0CL83 205 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 PCDH19Q8TAB3 1148 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 PNMA5Q96PV4 448 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 NMRAL1Q9HBL8 299 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 SEC22BO75396 215 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CYP2E1P05181 493 aaPredicted RBP17.9■□□□□ 0.46
SMAD4-201ENST00000342988 ADSSP30520 456 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 GRTP1Q5TC63 336 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 RASGRP2Q7LDG7 609 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 STK40Q8N2I9 435 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 MYCBPAPQ8TBZ2 947 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 FBXO10Q9UK96 956 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 PPEF2O14830 753 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CST8O60676 142 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 GH2P01242 217 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 RFC5P40937 340 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 OR1G1P47890 313 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 LMAN2LQ9H0V9 348 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 PPIL2Q13356 520 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CWF19L1Q69YN2 538 aaKnown RBP17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CIAPIN1Q6FI81 312 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 MRPS31Q92665 395 aaKnown RBP17.9■□□□□ 0.46
SMAD4-201ENST00000342988 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 FAIM2Q9BWQ8 316 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 DPYSQ14117 519 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CBWD3Q5JTY5 395 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 CBWD5Q5RIA9 395 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 SLFN11Q7Z7L1 901 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 PIGKQ92643 395 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 FAM118BQ9BPY3 351 aa17.9■□□□□ 0.46
SMAD4-201ENST00000342988 RPS6KA4O75676 772 aa17.89■□□□□ 0.46
SMAD4-201ENST00000342988 ADAM8P78325 824 aa17.89■□□□□ 0.46
SMAD4-201ENST00000342988 RBM20Q5T481 1227 aaKnown RBP17.89■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF549Q6P9A3 640 aa17.89■□□□□ 0.46
SMAD4-201ENST00000342988 PACS2Q86VP3 889 aa17.89■□□□□ 0.46
SMAD4-201ENST00000342988 CMTR2Q8IYT2 770 aaKnown RBP17.89■□□□□ 0.46
SMAD4-201ENST00000342988 SHCBP1LQ9BZQ2 653 aa17.89■□□□□ 0.46
SMAD4-201ENST00000342988 DMGDHQ9UI17 866 aaKnown RBP17.89■□□□□ 0.46
SMAD4-201ENST00000342988 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 CYP2A6P11509 494 aaPredicted RBP17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PTPN9P43378 593 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PLET1Q6UQ28 207 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF567Q8N184 647 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PLEKHG4BQ96PX9 1271 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TRPV5Q9NQA5 729 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 ACOT9Q9Y305 439 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 A0A087X1B8 175 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TAS2R41P59536 307 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TAS2R13Q9NYV9 303 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PCDHGB5Q9Y5G0 923 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 GP5P40197 560 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 IDH2P48735 452 aaKnown RBP17.89■□□□□ 0.45
SMAD4-201ENST00000342988 FAM92BQ6ZTR7 304 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 FBXO39Q8N4B4 442 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TAF6LQ9Y6J9 622 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PLK4O00444 970 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TNK2Q07912 1038 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 THRSPQ92748 146 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TMEM169Q96HH4 297 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 TUBB1Q9H4B7 451 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 GREM2Q9H772 168 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 CCNB1IP1Q9NPC3 277 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 METTL5Q9NRN9 209 aaKnown RBP17.89■□□□□ 0.45
SMAD4-201ENST00000342988 RASGEF1BQ0VAM2 473 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 PIK3R6Q5UE93 754 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms