RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TAX1BP1Q86VP1 789 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 LRRC6Q86X45 466 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ZNF276Q8N554 614 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 PDZD8Q8NEN9 1154 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 GDAP1Q8TB36 358 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 OVCA2Q8WZ82 227 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ZNF512Q96ME7 567 aaPredicted RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 CDK5RAP1Q96SZ6 601 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 CASS4Q9NQ75 786 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 TMEM248Q9NWD8 314 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 SMG5Q9UPR3 1016 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 GOLGA6L7A0A1B0GV03 622 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 CACNG3O60359 315 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 PGAM1P18669 254 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 KRT4P19013 534 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 SNX30Q5VWJ9 437 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 TIGD7Q6NT04 549 aaPredicted RBP20.43■□□□□ 0.86
RTN1-202ENST00000342503 CCNJLQ8IV13 435 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 UMODL1-AS1Q8N2C9 162 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 CKAP2Q8WWK9 683 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 AUTS2Q8WXX7 1259 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 UBP1Q9NZI7 540 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 DNMT3LQ9UJW3 386 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 HBS1LQ9Y450 684 aaKnown RBP20.43■□□□□ 0.86
RTN1-202ENST00000342503 YIPF1Q9Y548 306 aa20.43■□□□□ 0.86
RTN1-202ENST00000342503 ZNF840PA6NDX5 716 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 DRGXA6NNA5 263 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 TYROBPO43914 113 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 GJB5O95377 273 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 URODP06132 367 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 CSH1P0DML2 217 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 CSH2P0DML3 217 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 ATP5C1P36542 298 aaKnown RBP20.42■□□□□ 0.86
RTN1-202ENST00000342503 KCNQ1P51787 676 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 NDST2P52849 883 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 SLC18A1P54219 525 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 NADSYN1Q6IA69 706 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 CPLX4Q7Z7G2 160 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 LRRC34Q8IZ02 419 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 DENND1AQ8TEH3 1009 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 OXNAD1Q96HP4 312 aaPredicted RBP20.42■□□□□ 0.86
RTN1-202ENST00000342503 ZNF419Q96HQ0 510 aaPredicted RBP20.42■□□□□ 0.86
RTN1-202ENST00000342503 GLOD4Q9HC38 313 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 SSU72Q9NP77 194 aaKnown RBP20.42■□□□□ 0.86
RTN1-202ENST00000342503 MOCS1Q9NZB8 636 aa20.42■□□□□ 0.86
RTN1-202ENST00000342503 UGT1A9O60656 530 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 MT-ND3P03897 115 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 GBP2P32456 591 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 ALDH1A3P47895 512 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 WDR4P57081 412 aaKnown RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 RAB33AQ14088 237 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 TTC39BQ5VTQ0 682 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 CYS1Q717R9 158 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 OTOP2Q7RTS6 562 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 CHSY1Q86X52 802 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 LRRC49Q8IUZ0 686 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 KLHDC8BQ8IXV7 354 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.41■□□□□ 0.86
RTN1-202ENST00000342503 SGSM3Q96HU1 749 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 YME1L1Q96TA2 773 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 KLF6Q99612 283 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 NAT9Q9BTE0 207 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 LRRC40Q9H9A6 602 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 UGT1A7Q9HAW7 530 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 UGT1A10Q9HAW8 530 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 UGT1A8Q9HAW9 530 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 IPO11Q9UI26 975 aaKnown RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 ZNF180Q9UJW8 692 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 PSMD3O43242 534 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 ALDH1A2O94788 518 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 BAIAP3O94812 1187 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 HLA-DQB2P05538 268 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 TACR2P21452 398 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 DNAJB2P25686 324 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 RPA3P35244 121 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 PLD1Q13393 1074 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 HECTD3Q5T447 861 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 ACBD5Q5T8D3 534 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 UNC5BQ8IZJ1 945 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 DNAAF3Q8N9W5 541 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 MYEOVQ96EZ4 313 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 HMCESQ96FZ2 354 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 SERAC1Q96JX3 654 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 RPRD1AQ96P16 312 aaPredicted RBP20.41■□□□□ 0.86
RTN1-202ENST00000342503 FCRL5Q96RD9 977 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 APOL2Q9BQE5 337 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 NACA2Q9H009 215 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 IL23AQ9NPF7 189 aa20.41■□□□□ 0.86
RTN1-202ENST00000342503 RBM22Q9NW64 420 aaKnown RBP eCLIP20.41■□□□□ 0.86
RTN1-202ENST00000342503 ANAPC1Q9H1A4 1944 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 GOLGA8RI6L899 631 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 EBAG9O00559 213 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 VIMP08670 466 aaKnown RBP20.4■□□□□ 0.86
RTN1-202ENST00000342503 CA4P22748 312 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 CRYMQ14894 314 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 CIR1Q86X95 450 aaPredicted RBP20.4■□□□□ 0.86
RTN1-202ENST00000342503 SPATA22Q8NHS9 363 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 MYRFLQ96LU7 910 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 PAIP2Q9BPZ3 127 aaKnown RBP20.4■□□□□ 0.86
RTN1-202ENST00000342503 DONSONQ9NYP3 566 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms