RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 ZNF148Q9UQR1 794 aa21.12■□□□□ 0.97
CLDND1-201ENST00000341181 TYW5A2RUC4 315 aaKnown RBP21.11■□□□□ 0.97
CLDND1-201ENST00000341181 PENKP01210 267 aaPredicted RBP21.11■□□□□ 0.97
CLDND1-201ENST00000341181 RBL1P28749 1068 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 IFNAR2P48551 515 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 CDH18Q13634 790 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 HTR4Q13639 388 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 DHCR24Q15392 516 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 CCNYQ8ND76 341 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 OR7D4Q8NG98 312 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 ELSPBP1Q96BH3 223 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 OTUB2Q96DC9 234 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 EPB41L5Q9HCM4 733 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 HPS4Q9NQG7 708 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 PCYOX1Q9UHG3 505 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 TBC1D30Q9Y2I9 924 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 CHD5Q8TDI0 1954 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 SHROOM3Q8TF72 1996 aa21.11■□□□□ 0.97
CLDND1-201ENST00000341181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 RASA4BC9J798 803 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 H0Y626 953 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 SLC9A3R1O14745 358 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 RASA4O43374 803 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 TYRP14679 529 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 CARSP49589 748 aaKnown RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 PAPOLAP51003 745 aaKnown RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 ZNF177Q13360 481 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 DARS2Q6PI48 645 aaKnown RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 LZTR1Q8N653 840 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 FAM71DQ8N9W8 422 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 ZNF419Q96HQ0 510 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 TRIM51Q9BSJ1 452 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 CEP41Q9BYV8 373 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 HOMER3Q9NSC5 361 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 TRIM24O15164 1050 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 ETS1P14921 441 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 PSMC3P17980 439 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 GLDCP23378 1020 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 MZF1P28698 734 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 PTGIRP43119 386 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 DR1Q01658 176 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 AP1B1Q10567 949 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 POLD3Q15054 466 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 PRKD1Q15139 912 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-201ENST00000341181 SLC45A4Q5BKX6 768 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 TTC8Q8TAM2 541 aa21.1■□□□□ 0.97
CLDND1-201ENST00000341181 KCNK1O00180 336 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 CYBBP04839 570 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ITGAVP06756 1048 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 RHOCP08134 193 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 NDST2P52849 883 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 CBX1P83916 185 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 GNA12Q03113 381 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 PDK1Q15118 436 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 TRIP13Q15645 432 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 SMAD2Q15796 467 aaKnown RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 MPP7Q5T2T1 576 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ASTLQ6HA08 431 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 C12orf40Q86WS4 652 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ATPAF2Q8N5M1 289 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 NAT16Q8N8M0 369 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 MAFAQ8NHW3 353 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 TFB1MQ8WVM0 346 aaKnown RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 IFT81Q8WYA0 676 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 HDAC11Q96DB2 347 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 FRMD8P1Q9BZ68 369 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 USP29Q9HBJ7 922 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 GTSE1Q9NYZ3 720 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ANHXE9PGG2 379 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 SGK1O00141 431 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 RRP9O43818 475 aaKnown RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 MAFKO60675 156 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ECI2O75521 394 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ZSCAN5DPP0CG00 497 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 PPIDQ08752 370 aaKnown RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 LEXMQ3ZCV2 418 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 C6orf118Q5T5N4 469 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 CCDC70Q6NSX1 233 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 LEKR1Q6ZMV7 388 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 SETD3Q86TU7 594 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ALLCQ8N6M5 410 aa21.09■□□□□ 0.97
CLDND1-201ENST00000341181 ARHGEF2Q92974 986 aaKnown RBP21.09■□□□□ 0.97
CLDND1-201ENST00000341181 J3KR12 359 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 PPP1R12AO14974 1030 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-201ENST00000341181 KCNN4O15554 427 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 ERLIN1O75477 346 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 IFNB1P01574 187 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 IL9P15248 144 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 HLA-FP30511 346 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 GDI1P31150 447 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 CD70P32970 193 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 MESP2Q0VG99 397 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 XRCC4Q13426 336 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 RNF219Q5W0B1 726 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-201ENST00000341181 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-201ENST00000341181 PTCRAQ6ISU1 281 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-201ENST00000341181 JAMLQ86YT9 394 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 ATL2Q8NHH9 583 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 CASKIN2Q8WXE0 1202 aa21.08■□□□□ 0.97
CLDND1-201ENST00000341181 ATP2A3Q93084 1043 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms