RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KCTD13Q8WZ19 329 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 EEF2KMTQ96G04 330 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 FAM117AQ9C073 453 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 DNAI2Q9GZS0 605 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 ABCG4Q9H172 646 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 TMEM8AQ9HCN3 771 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 SERTAD1Q9UHV2 236 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 TRPM6Q9BX84 2022 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 K7ESM1 405 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC7A4O43246 635 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 FYNP06241 537 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 RBMS1P29558 406 aaKnown RBP16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 CLDN2P57739 230 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 SETMARQ53H47 684 aaPredicted RBP16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 HS1BP3Q53T59 392 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 C6orf132Q5T0Z8 1188 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 RNF219Q5W0B1 726 aaPredicted RBP16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 SCML4Q8N228 414 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 CCDC150Q8NCX0 1101 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 SPAG5Q96R06 1193 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 CALN1Q9BXU9 219 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 CNGB3Q9NQW8 809 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 EXOC1Q9NV70 894 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 NLGN3Q9NZ94 848 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 TJP2Q9UDY2 1190 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 TRAF3IP3Q9Y228 551 aa16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
NECTIN1-202ENST00000340882 RNF103O00237 685 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 RNGTTO60942 597 aaKnown RBP16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 MOCS2O96007 188 aaPredicted RBP16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 ITGB6P18564 788 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 NR2F2P24468 414 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 NUDT1P36639 197 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 SRSF6Q13247 344 aaKnown RBP16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 CDKN3Q16667 212 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 SGO2Q562F6 1265 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 KRT39Q6A163 491 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 PMF1Q6P1K2 205 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 GUSBP11Q6P575 273 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 FOXR1Q6PIV2 292 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 CRTC1Q6UUV9 634 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 LGI2Q8N0V4 545 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 ARRDC3Q96B67 414 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC39A13Q96H72 371 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 PPM1HQ9ULR3 514 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 RELNP78509 3460 aa16.87■□□□□ 0.29
NECTIN1-202ENST00000340882 SCN8AQ9UQD0 1980 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 A0A1W2PQU0 124 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 TYW5A2RUC4 315 aaKnown RBP16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 O00370 1275 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 SCAMP1O15126 338 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 CALUO43852 315 aaPredicted RBP16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 MOCS3O95396 460 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 LTFP02788 710 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 CD19P15391 556 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 PDGFRAP16234 1089 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 DRAP1Q14919 205 aaPredicted RBP16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 ZNF284Q2VY69 593 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 RAP1GAP2Q684P5 730 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 GCNT7Q6ZNI0 430 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 DQX1Q8TE96 717 aaKnown RBP16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 TFAP2BQ92481 460 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 PAGE5Q96GU1 130 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 STARD5Q9NSY2 213 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 RAB20Q9NX57 234 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 HESX1Q9UBX0 185 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 PCDHGA8Q9Y5G5 932 aa16.86■□□□□ 0.29
NECTIN1-202ENST00000340882 CPED1A4D0V7 1026 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 CALCAP01258 141 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 NEFLP07196 543 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 ALPPL2P10696 532 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 KRT13P13646 458 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 MCCD1P59942 119 aaPredicted RBP16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 PERM1Q5SV97 790 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 PIP5KL1Q5T9C9 394 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 RESP18Q5W5W9 173 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 OR6B2Q6IFH4 312 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 CLEC14AQ86T13 490 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 FBXL13Q8NEE6 735 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 OR52K2Q8NGK3 314 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC35F5Q8WV83 523 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 OR8D1Q8WZ84 308 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 EXTL1Q92935 676 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 CCNL2Q96S94 520 aaPredicted RBP16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 DNAJC28Q9NX36 388 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 PCDHA7Q9UN72 937 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 ZFR2Q9UPR6 939 aaKnown RBP16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 MAPK8IP1Q9UQF2 711 aa16.85■□□□□ 0.29
NECTIN1-202ENST00000340882 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms