RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 SYNCRIPO60506 623 aaKnown RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 RTN2O75298 545 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 NRG1Q02297 640 aaPredicted RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 LYSMD4Q5XG99 296 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 SPECC1LQ69YQ0 1117 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 METTL3Q86U44 580 aaKnown RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 VSTM4Q8IW00 320 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 KDM1BQ8NB78 822 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 NTAN1Q96AB6 310 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 FEM1AQ9BSK4 669 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 CNPY3Q9BT09 278 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 MTG2Q9H4K7 406 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 PRSS16Q9NQE7 514 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 PARVAQ9NVD7 372 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 MPP6Q9NZW5 540 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 ARHGAP20Q9P2F6 1191 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 ADAMTS1Q9UHI8 967 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 NEU3Q9UQ49 428 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 ERVW-1Q9UQF0 538 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.83■□□□□ 0.12
VAPA-201ENST00000340541 NYNRINQ9P2P1 1898 aaKnown RBP15.82■□□□□ 0.12
VAPA-201ENST00000340541 A0A087X0T9 212 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 IGHV1OR15-9A0A0B4J2B8 117 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 TMEM191CA6NGB0 347 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 FAM72CH0Y354 149 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 MOCS3O95396 460 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 PROS1P07225 676 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 SRPRAP08240 638 aaKnown RBP15.82■□□□□ 0.12
VAPA-201ENST00000340541 FAM228BP0C875 321 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 PTGER3P43115 390 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 NUMBP49757 651 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 OXCT1P55809 520 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 ECT2LQ008S8 904 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 ZNF252P-AS1Q0IIN9 211 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 SCAPQ12770 1279 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 DUOXA1Q1HG43 343 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 TDRD12Q587J7 1177 aaKnown RBP15.82■□□□□ 0.12
VAPA-201ENST00000340541 FAM72AQ5TYM5 149 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 FAM72DQ6L9T8 149 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 DCUN1D2Q6PH85 259 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 FAM72BQ86X60 149 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 TMPRSS6Q8IU80 811 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 OR2T3Q8NH03 318 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 TRIM7Q9C029 511 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 OSBPL2Q9H1P3 480 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 SLC32A1Q9H598 525 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 PRDM16Q9HAZ2 1276 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 TMEM74BQ9NUR3 256 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 USP36Q9P275 1121 aaKnown RBP15.82■□□□□ 0.12
VAPA-201ENST00000340541 CNOT8Q9UFF9 292 aaKnown RBP15.82■□□□□ 0.12
VAPA-201ENST00000340541 SLCO3A1Q9UIG8 710 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 NENFQ9UMX5 172 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 WASF3Q9UPY6 502 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 USP24Q9UPU5 2620 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 CEP192Q8TEP8 1941 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 CHD5Q8TDI0 1954 aa15.82■□□□□ 0.12
VAPA-201ENST00000340541 ANKRD62A6NC57 917 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 TTC34A8MYJ7 566 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 GIPC1O14908 333 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 SRGAP2O75044 1071 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 SERPINF2P08697 491 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 STK19P49842 368 aaPredicted RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 HNRNPA1L2Q32P51 320 aaKnown RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 ARL13BQ3SXY8 428 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 GON4LQ3T8J9 2241 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 RNF219Q5W0B1 726 aaPredicted RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 SARM1Q6SZW1 724 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 KIAA1324Q6UXG2 1013 aaKnown RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 LRRC31Q6UY01 552 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 TMC6Q7Z403 805 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 SETD3Q86TU7 594 aaPredicted RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 ARFGAP1Q8N6T3 406 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 RPL10LQ96L21 214 aaKnown RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 PSMB7Q99436 277 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 DNAJC7Q99615 494 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 ZYG11BQ9C0D3 744 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 ITM2CQ9NQX7 267 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
VAPA-201ENST00000340541 OR12D3Q9UGF7 316 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 CYP8B1Q9UNU6 501 aa15.81■□□□□ 0.12
VAPA-201ENST00000340541 CEP295Q9C0D2 2601 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 A0A0D9SEW6 157 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 LRIG2O94898 1065 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 IGLV3-19P01714 112 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 MYBL1P10243 752 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 ENGP17813 658 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 VASPP50552 380 aaPredicted RBP15.8■□□□□ 0.12
VAPA-201ENST00000340541 RPL6Q02878 288 aaKnown RBP15.8■□□□□ 0.12
VAPA-201ENST00000340541 SULT2A1Q06520 285 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 TRIM14Q14142 442 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 TFAP2DQ7Z6R9 452 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 SLFN11Q7Z7L1 901 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 NLRP14Q86W24 1093 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms