RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SLC9B1Q4ZJI4 515 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 SGO1Q5FBB7 561 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 ZNF484Q5JVG2 852 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP1-201ENST00000339950 RMDN1Q96DB5 314 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 GRIP2Q9C0E4 1043 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 PIGVQ9NUD9 493 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 LRCH1Q9Y2L9 728 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 AGRPO00253 132 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 PARNO95453 639 aaKnown RBP12.18□□□□□ -0.46
USP1-201ENST00000339950 GRIA4P48058 902 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 ZNF132P52740 706 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
USP1-201ENST00000339950 FASTKD5Q7L8L6 764 aaKnown RBP12.18□□□□□ -0.46
USP1-201ENST00000339950 ACVR1CQ8NER5 493 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 URGCPQ8TCY9 931 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 ERLEC1Q96DZ1 483 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 CMTM5Q96DZ9 223 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 LRRC40Q9H9A6 602 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 GIMAP2Q9UG22 337 aa12.18□□□□□ -0.46
USP1-201ENST00000339950 CORO1CQ9ULV4 474 aaPredicted RBP12.18□□□□□ -0.46
USP1-201ENST00000339950 RFPL1O75677 317 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 SOAT2O75908 522 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PRKCGP05129 697 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 KCNJ11Q14654 390 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 GRM3Q14832 879 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 TCEAL1Q15170 157 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 PANX3Q96QZ0 392 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 XPR1Q9UBH6 696 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PMM2O15305 246 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ITGB6P18564 788 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 THPOP40225 353 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 CCDC15Q0P6D6 951 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 EFEMP1Q12805 493 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 C9orf57Q5W0N0 161 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 SEL1L3Q68CR1 1132 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 FSTL4Q6MZW2 842 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PDZD8Q8NEN9 1154 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 OR51F1A6NGY5 319 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 TRIM13O60858 407 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 KLHL2O95198 593 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PTPN7P35236 360 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 AQP4P55087 323 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ARHGAP22Q7Z5H3 698 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 METTL23Q86XA0 190 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 NRG4Q8WWG1 115 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 SLC45A3Q96JT2 553 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 SIGLEC10Q96LC7 697 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 TUBGCP5Q96RT8 1024 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 ACE2Q9BYF1 805 aaPredicted RBP12.17□□□□□ -0.46
USP1-201ENST00000339950 SP110Q9HB58 689 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 PCDHA11Q9Y5I1 949 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
USP1-201ENST00000339950 LINGO3P0C6S8 592 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 SMPD1P17405 629 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 OR1G1P47890 313 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 PHEXP78562 749 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ESRP1Q6NXG1 681 aaKnown RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 OLFML1Q6UWY5 402 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 GK5Q6ZS86 529 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 FRMD7Q6ZUT3 714 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ANKRD52Q8NB46 1076 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 Q9H521 79 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 GBA2Q9HCG7 927 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 EGFL7Q9UHF1 273 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 STYXL1Q9Y6J8 313 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 PLIN3O60664 434 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 IRF1P10914 325 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 CES1P23141 567 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 STX1BP61266 288 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 SOX4Q06945 474 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 FAM83EQ2M2I3 478 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 CLEC6AQ6EIG7 209 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 TDRPQ86YL5 185 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 BHLHE22Q8NFJ8 381 aaPredicted RBP12.16□□□□□ -0.46
USP1-201ENST00000339950 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
USP1-201ENST00000339950 FAM193BQ96PV7 902 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms