RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C1QTNF7Q9BXJ2 289 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 DGCR6LQ9BY27 220 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 BRD7Q9NPI1 651 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 PKD2L2Q9NZM6 624 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SEPT10Q9P0V9 454 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF221Q9UK13 617 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 DNPEPQ9ULA0 475 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 AFDNP55196 1824 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 EP400Q96L91 3159 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TIPRLO75663 272 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT18P05783 430 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT7P08729 469 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 FDX1P10109 184 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ATF7P17544 494 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 GPD2P43304 727 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CBX5P45973 191 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 MRPS5P82675 430 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC18A2Q05940 514 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 C1QBPQ07021 282 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 DPYSQ14117 519 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ACAP2Q15057 778 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TATDN1Q6P1N9 297 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CAND1Q86VP6 1230 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CTAGE3PQ8IX95 158 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ANKRD49Q8WVL7 239 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 RAPGEF4Q8WZA2 1011 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TOE1Q96GM8 510 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TMLHEQ9NVH6 421 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 PRR12Q9ULL5 1215 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TESMINQ9Y4I5 508 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ZHX2Q9Y6X8 837 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ASTN2O75129 1339 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 DNALI1O14645 258 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TBX1O43435 398 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 AKAP10O43572 662 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CALM1P0DP23 149 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CALM2P0DP24 149 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CALM3P0DP25 149 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 CALML3P27482 149 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 EPHX2P34913 555 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 NRLP54845 237 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 TBCCQ15814 346 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC35G1Q2M3R5 365 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 HMBOX1Q6NT76 420 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SH3BP5LQ7L8J4 393 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ERMP1Q7Z2K6 904 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 METTL3Q86U44 580 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 KCTD4Q8WVF5 259 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 IP6K1Q92551 441 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SH3KBP1Q96B97 665 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 AK8Q96MA6 479 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ANKRD60Q9BZ19 345 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 LHPPQ9H008 270 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC38A10Q9HBR0 1119 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 SYTL2Q9HCH5 934 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 IL37Q9NZH6 218 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 GMPR2Q9P2T1 348 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 REV1Q9UBZ9 1251 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 IP6K2Q9UHH9 426 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 VPS4AQ9UN37 437 aa9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-201ENST00000339488 COL18A1P39060 1754 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 DAB1O75553 588 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 GCATO75600 419 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 MARSP56192 900 aaKnown RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 C19orf57Q0VDD7 668 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 POLD3Q15054 466 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 ALX1Q15699 326 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 PTPN20Q4JDL3 420 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 POTEAQ6S8J7 498 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 ZBTB49Q6ZSB9 765 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 KIAA0408Q6ZU52 694 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 ADGRA1Q86SQ6 560 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 IGDCC3Q8IVU1 814 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 MFSD4AQ8N468 514 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 FAM83FQ8NEG4 500 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 CMASQ8NFW8 434 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 TBCKQ8TEA7 893 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 BIRC7Q96CA5 298 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 RCN3Q96D15 328 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 C17orf62Q9BQA9 187 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 GHITMQ9H3K2 345 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 NTN4Q9HB63 628 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 TCRBV7S3A2A0A539 114 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 E7ENX8 843 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 M0R2N6 131 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 NEMP1O14524 444 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 CPNE3O75131 537 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms