RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 S100A8P05109 93 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 HMOX1P09601 288 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PRKAR2AP13861 404 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 HTR2BP41595 481 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 BTDP43251 543 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 NT5C2P49902 561 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 GABARAPL2P60520 117 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PCDH1Q08174 1060 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CAPRIN1Q14444 709 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 INPP5AQ14642 412 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 VARS2Q5ST30 1063 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ZDHHC24Q6UX98 284 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 TOM1L2Q6ZVM7 507 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 C16orf62Q7Z3J2 963 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PRSS42Q7Z5A4 293 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 FBXO30Q8TB52 745 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 TARS2Q9BW92 718 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CCDC90BQ9GZT6 254 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 AGPAT5Q9NUQ2 364 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 GTF2IRD1Q9UHL9 959 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 RAPGEFL1Q9UHV5 662 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CDH22Q9UJ99 828 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PIPSLA2A3N6 862 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MRPS14O60783 128 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MYL2P10916 166 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PLS3P13797 630 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PRKCIP41743 596 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ARL4CP56559 192 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 GALK2Q01415 458 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PPATQ06203 517 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 USP50Q70EL3 339 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MAPKAPK5Q8IW41 473 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 POC5Q8NA72 575 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 SLC7A3Q8WY07 619 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 POP5Q969H6 163 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 NXPE2Q96DL1 559 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 SGTBQ96EQ0 304 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF285Q96NJ3 590 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 FAM118BQ9BPY3 351 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PIGUQ9H490 435 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 TUT1Q9H6E5 874 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 C14orf93Q9H972 538 aaKnown RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MLXIPLQ9NP71 852 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 GRHL1Q9NZI5 618 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 KLHL21Q9UJP4 597 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 KLF2Q9Y5W3 355 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 DUSP10Q9Y6W6 482 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 EMSYQ7Z589 1322 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 A0A0G2JPF8 293 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CCDC78A2IDD5 438 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 LINC00862A6NCI5 91 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 HNRNPCL3B7ZW38 293 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 RNF225M0QZC1 329 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ACSL3O95573 720 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 HNRNPCL4P0DMR1 293 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PSKH1P11801 424 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PRG2P13727 222 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MCM7P33993 719 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CAP2P40123 477 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 STARD3Q14849 445 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PON2Q15165 354 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 MROH9Q5TGP6 573 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 GPR107Q5VW38 600 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 TIGD3Q6B0B8 471 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PYHIN1Q6K0P9 492 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 RINT1Q6NUQ1 792 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 KBTBD6Q86V97 674 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 LIX1LQ8IVB5 337 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CLEC4FQ8N1N0 589 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 TMIEQ8NEW7 156 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PYDC1Q8WXC3 89 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ELMO2Q96JJ3 720 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 CCDC32Q9BV29 185 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF416Q9BWM5 594 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 RAB34Q9BZG1 259 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 PLCL2Q9UPR0 1127 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 BTBD3Q9Y2F9 522 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 RAD54BQ9Y620 910 aa4.23□□□□□ -1.73
NEDD4-201ENST00000338963 DISP2A7MBM2 1401 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 LACTBL1A8MY62 500 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 F8W036 122 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 KCNK1O00180 336 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF213O14771 459 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 DYNC1LI2O43237 492 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 CSPG5O95196 566 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 SEC24AO95486 1093 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 NCF2P19878 526 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 RAD23AP54725 363 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PTPN12Q05209 780 aaKnown RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 STX5Q13190 355 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ELOAQ14241 798 aaKnown RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 TCEAL1Q15170 157 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 KDELC1Q6UW63 502 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 NOXA1Q86UR1 476 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 SLC22A16Q86VW1 577 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 GLYCTKQ8IVS8 523 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 IFNL3Q8IZI9 196 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 LRRC71Q8N4P6 559 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms