RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 KCNK1O00180 336 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 RRM1P23921 792 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 SKP1P63208 163 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 GRIK4Q16099 956 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 OR52L1Q8NGH7 329 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ITFG1Q8TB96 612 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 OSCP1Q8WVF1 389 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 CDK5RAP1Q96SZ6 601 aaKnown RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 EPB41L4AQ9HCS5 686 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 MSRAQ9UJ68 235 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 PDHXO00330 501 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 MED24O75448 989 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 TFPIP10646 304 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 CNSTQ6PJW8 725 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 REPS1Q96D71 796 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 FAM129BQ96TA1 746 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 RIT2Q99578 217 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 TBL1YQ9BQ87 522 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ZFP14Q9HCL3 533 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 OSGEPQ9NPF4 335 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 GULP1Q9UBP9 304 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 MORC2Q9Y6X9 1032 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 A0A088AWK7 358 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 TAF4O00268 1085 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 RGS14O43566 566 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ZNF10P21506 573 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-201ENST00000338508 S100A3P33764 101 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 OMPP47874 163 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 BEX3Q00994 111 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ABRQ12979 859 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 USP45Q70EL2 814 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 TSPAN16Q9UKR8 245 aa11.96□□□□□ -0.49
SHANK2-201ENST00000338508 ERVK-7P63135 1459 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 TM9SF1O15321 606 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ENTPD3O75355 529 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 S100GP29377 79 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 STARP49675 285 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 RENBPP51606 427 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ARF3P61204 181 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.5
SHANK2-201ENST00000338508 TM6SF2Q9BZW4 377 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ATP9AO75110 1047 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 DBIP07108 87 aaKnown RBP11.96□□□□□ -0.5
SHANK2-201ENST00000338508 TLX1P31314 330 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-201ENST00000338508 MAPK7Q13164 816 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 MADCAM1Q13477 382 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-201ENST00000338508 SPANXN2Q5MJ10 180 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ARMC12Q5T9G4 340 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 RUBCNQ92622 972 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 CLCC1Q96S66 551 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 CROTQ9UKG9 612 aa11.96□□□□□ -0.5
SHANK2-201ENST00000338508 ISM1B1AKI9 464 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 CD3EAPO15446 510 aaKnown RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 MPOP05164 745 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 16.3
SHANK2-201ENST00000338508 ARHGDIBP52566 201 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 DHFR2Q86XF0 187 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 CLVS1Q8IUQ0 354 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 SETD6Q8TBK2 473 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 MTG1Q9BT17 334 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 EPB41L1Q9H4G0 881 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 TCF7L2Q9NQB0 619 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 LRCH1Q9Y2L9 728 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 RCAN1P53805 252 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 CCDC153Q494R4 210 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 TMEM237Q96Q45 408 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 TKTL2Q9H0I9 626 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 H3BRB1 525 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 SPATA31D3P0C874 917 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 CYP2A13Q16696 494 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 RETSATQ6NUM9 610 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 SPATA31D4Q6ZUB0 917 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 SLC41A1Q8IVJ1 513 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 CATSPERZQ9NTU4 200 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 PTGFRNQ9P2B2 879 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 PSMD9O00233 223 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 PLOD3O60568 738 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 ACADSP16219 412 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 ATP5F1P24539 256 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-201ENST00000338508 NRG3P56975 720 aa11.95□□□□□ -0.5
SHANK2-201ENST00000338508 MAP1SQ66K74 1059 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms