RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ADGRA2Q96PE1 1338 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CA12O43570 354 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 TCN1P20061 433 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 NUDT2P50583 147 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 MAMDC4Q6UXC1 1216 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 KYAT3Q6YP21 454 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SLC24A5Q71RS6 500 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CLEC4CQ8WTT0 213 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SENP6Q9GZR1 1112 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SFMBT1Q9UHJ3 866 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 TRPC5OSA6NMA1 111 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 STBD1O95210 358 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CRABP2P29373 138 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PRKAA1Q13131 559 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 C16orf89Q6UX73 402 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CYP4X1Q8N118 509 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ACMSDQ8TDX5 336 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 FGD4Q96M96 766 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ADGRE3Q9BY15 652 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 DRC3Q9H069 523 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 C12orf65Q9H3J6 166 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PTPRHQ9HD43 1115 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 E9PBE3 544 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 KLHL41O60662 606 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 METTL18O95568 372 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SERPINB5P36952 375 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SLC25A11Q02978 314 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SCARA3Q6AZY7 606 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 IRGQQ8WZA9 623 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 KLHL5Q96PQ7 755 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 KCTD15Q96SI1 283 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 KCNK4Q9NYG8 393 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 MOSPD1Q9UJG1 213 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 COL18A1P39060 1754 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PIRO00625 290 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PAGE1O75459 146 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CNMDO75829 334 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 INCA1Q0VD86 236 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ARHGEF7Q14155 803 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RBBP7Q16576 425 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 HECTD3Q5T447 861 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 VSTM1Q6UX27 236 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PACS2Q86VP3 889 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 TMPRSS6Q8IU80 811 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 AAASQ9NRG9 546 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CRLS1Q9UJA2 301 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 DOT1LQ8TEK3 1739 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 YJEFN3A6XGL0 299 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 E7ENQ6 273 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 L1CAMP32004 1257 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 GABRB2P47870 512 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 POLE2P56282 527 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CDK18Q07002 472 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 MED21Q13503 144 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RCN1Q15293 331 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 EFL1Q7Z2Z2 1120 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 TDRPQ86YL5 185 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ST13P4Q8IZP2 240 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 GPR152Q8TDT2 470 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 DCUN1D1Q96GG9 259 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 HCRTO43612 131 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CRHR2Q13324 411 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CMC1Q7Z7K0 106 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 YME1L1Q96TA2 773 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SYT11Q9BT88 431 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ANKRD36CQ5JPF3 1778 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 FAM155BO75949 473 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CBX6O95503 412 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PCYOX1LQ8NBM8 494 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 NCLNQ969V3 563 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 LGALS13Q9UHV8 139 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ZW10O43264 779 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 MT-CO1P00395 513 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CRYMQ14894 314 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 TIGD5Q53EQ6 642 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 UGT3A1Q6NUS8 523 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SEC14L1Q92503 715 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SYBUQ9NX95 663 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RGS17Q9UGC6 210 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PGAP2Q9UHJ9 254 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RAD54BQ9Y620 910 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 USP54Q70EL1 1684 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PRPF4O43172 522 aaKnown RBP eCLIP6.41□□□□□ -1.382e-6■■□□□ 14.1
PRKDC-202ENST00000338368 ABCE1P61221 599 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 AARS2Q5JTZ9 985 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RPAINQ86UA6 219 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 BATF3Q9NR55 127 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RIC8BQ9NVN3 520 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SOX13Q9UN79 622 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CCDC88CQ9P219 2028 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 AKAP11Q9UKA4 1901 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 C5orf60A6NFR6 353 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 ADCY6O43306 1168 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 PIGNO95427 931 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 RAG1P15918 1043 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 CLDN10P78369 228 aa6.4□□□□□ -1.38
PRKDC-202ENST00000338368 CERCAMQ5T4B2 595 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms