RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 DLDP09622 509 aaKnown RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 HNRNPLP14866 589 aaKnown RBP eCLIP15.76■□□□□ 0.11
SEC13-201ENST00000337354 AMPD1P23109 780 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 MSNP26038 577 aaKnown RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 MZF1P28698 734 aaPredicted RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 SERPINB6P35237 376 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 CETN2P41208 172 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 COPS2P61201 443 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 POLD3Q15054 466 aaPredicted RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 PARP15Q460N3 678 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 TMEM215Q68D42 235 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 MAMSTRQ6ZN01 415 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 APCDD1Q8J025 514 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 KDM1BQ8NB78 822 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 OR52K2Q8NGK3 314 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 KRT35Q92764 455 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 RNF25Q96BH1 459 aaPredicted RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 RNF157Q96PX1 679 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 NDFIP2Q9NV92 336 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 TRMT1Q9NXH9 659 aaKnown RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 VPS28Q9UK41 221 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 INTS6Q9UL03 887 aaKnown RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 PYCARDQ9ULZ3 195 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 A0A0D9SEW6 157 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 DCLK1O15075 740 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 KIF5CO60282 957 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 RNF40O75150 1001 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 FTCDO95954 541 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 SRPRAP08240 638 aaKnown RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 ZFXP17010 805 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 NNMTP40261 264 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 VASPP50552 380 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 SLC20A2Q08357 652 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 TAZQ16635 292 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 FUT11Q495W5 492 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 SDE2Q6IQ49 451 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ZNF513Q8N8E2 541 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 DCAF4L2Q8NA75 395 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 PCDH19Q8TAB3 1148 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 USP33Q8TEY7 942 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ARHGEF2Q92974 986 aaKnown RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 TRIM44Q96DX7 344 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 ACE2Q9BYF1 805 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 CHRDQ9H2X0 955 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 RBM12Q9NTZ6 932 aaKnown RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 KLHL11Q9NVR0 708 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 THAP10Q9P2Z0 257 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 HPCAL4Q9UM19 191 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 EFR3BQ9Y2G0 817 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 PI15O43692 258 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 CDKN2BP42772 138 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ST8SIA6P61647 398 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ECT2LQ008S8 904 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 MMRN1Q13201 1228 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 TFDP2Q14188 446 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 PAFAH1B3Q15102 231 aaKnown RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 C2orf27AQ580R0 203 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 TFDP3Q5H9I0 405 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 EMC10Q5UCC4 262 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 AFMIDQ63HM1 303 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 IL31Q6EBC2 164 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 RETSATQ6NUM9 610 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 LRRC49Q8IUZ0 686 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 TMEM105Q8N8V8 129 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.75■□□□□ 0.11
SEC13-201ENST00000337354 SPON2Q9BUD6 331 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 KLC2Q9H0B6 622 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 LRRC19Q9H756 370 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ATP13A1Q9HD20 1204 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 DLGAP2Q9P1A6 1054 aa15.75■□□□□ 0.11
SEC13-201ENST00000337354 ZSCAN5CA6NGD5 496 aaPredicted RBP15.74■□□□□ 0.11
SEC13-201ENST00000337354 ARHGAP42A6NI28 874 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 RASA4BC9J798 803 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 RASA4O43374 803 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 KDELR3O43731 214 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 DCNP07585 359 aaKnown RBP15.74■□□□□ 0.11
SEC13-201ENST00000337354 AVPR2P30518 371 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 NTSR1P30989 418 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 TIE1P35590 1138 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SEC13P55735 322 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 GEMIN4P57678 1058 aaKnown RBP15.74■□□□□ 0.11
SEC13-201ENST00000337354 ENPP2Q13822 863 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 RPS6KA1Q15418 735 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 PPP2R5EQ16537 467 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 EOGTQ5NDL2 527 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SLC9A4Q6AI14 798 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 MFSD7Q6UXD7 560 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SPOCD1Q6ZMY3 1216 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SFTPA1Q8IWL2 248 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SPEM1Q8N4L4 309 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 OR7D4Q8NG98 312 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 RPLP0P6Q8NHW5 317 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 SLC39A8Q9C0K1 460 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 NOL6Q9H6R4 1146 aaKnown RBP15.74■□□□□ 0.11
SEC13-201ENST00000337354 SLC8A2Q9UPR5 921 aa15.74■□□□□ 0.11
SEC13-201ENST00000337354 JRKLQ9Y4A0 524 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms