RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SPATA13Q96N96 652 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 NPAS2Q99743 824 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 TRIM8Q9BZR9 551 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 ABCG8Q9H221 673 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 LRRC40Q9H9A6 602 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 COG4Q9H9E3 785 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 PIDD1Q9HB75 910 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 ARHGEF4Q9NR80 690 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 LGALS13Q9UHV8 139 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 NRP1O14786 923 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 CD4P01730 458 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 LMNAP02545 664 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 GP5P40197 560 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 DSG1Q02413 1049 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 SV2CQ496J9 727 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 C6orf10Q5SRN2 563 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 C9orf57Q5W0N0 161 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TAS2R42Q7RTR8 314 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 AMIGO2Q86SJ2 522 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TRIM74Q86UV6 250 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TRIM73Q86UV7 250 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 CAND1Q86VP6 1230 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 CFAP52Q8N1V2 620 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 ANKRD52Q8NB46 1076 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 GPAMQ9HCL2 828 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PIGVQ9NUD9 493 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 HACD3Q9P035 362 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 CHADO15335 359 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PRPF4O43172 522 aaKnown RBP eCLIP8.39□□□□□ -1.07
HPS4-201ENST00000336873 SPAG6O75602 509 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TBX18O95935 607 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 LTFP02788 710 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 T-ENOLP0DO92 83 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 HDCP19113 662 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 SERPINB9P50453 376 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TUBP50607 506 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TSPY1Q01534 308 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TWF1Q12792 350 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 RALGDSQ12967 914 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 SEMA5AQ13591 1074 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 C10orf120Q5SQS8 335 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TMC7Q7Z402 723 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 ST13P4Q8IZP2 240 aaPredicted RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 MIER2Q8N344 545 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 URGCPQ8TCY9 931 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 GDPD5Q8WTR4 605 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 CMTM5Q96DZ9 223 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 LENG8Q96PV6 779 aaPredicted RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 C20orf27Q9GZN8 174 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 LRMDAQ9H2I8 198 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 XPR1Q9UBH6 696 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PPM1HQ9ULR3 514 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 C2CD2Q9Y426 696 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 OR51F1A6NGY5 319 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 BTBD19C9JJ37 291 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 BPGMP07738 259 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 NPR3P17342 541 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 NMBRP28336 390 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TKTP29401 623 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 ATICP31939 592 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 GRIA4P48058 902 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 LILRA4P59901 499 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PTPRCAPQ14761 206 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 SEL1L3Q68CR1 1132 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 TLDC1Q6P9B6 456 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 GPR142Q7Z601 462 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 RNF168Q8IYW5 571 aaPredicted RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 TMEM40Q8WWA1 233 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 RCN3Q96D15 328 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 PRPF18Q99633 342 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 PAPOLBQ9NRJ5 636 aaKnown RBP8.39□□□□□ -1.07
HPS4-201ENST00000336873 EPS15L1Q9UBC2 864 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 SLC7A8Q9UHI5 535 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 ACOT9Q9Y305 439 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 ACTL7BQ9Y614 415 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 NRAPQ86VF7 1730 aa8.39□□□□□ -1.07
HPS4-201ENST00000336873 ARID1BQ8NFD5 2236 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 TRIM13O60858 407 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ARSAP15289 507 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 STMN1P16949 149 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 L1CAMP32004 1257 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SCNN1BP51168 640 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ZNF280AP59817 542 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 SEMG2Q02383 582 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 GALNTL6Q49A17 601 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 DNAL1Q4LDG9 190 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 FSTL4Q6MZW2 842 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 PLPPR4Q7Z2D5 763 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms