RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CCDC130P13994 396 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 RAG1P15918 1043 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 HNMTP50135 292 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SGCGQ13326 291 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ITGADQ13349 1161 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 BMPR2Q13873 1038 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ARHGEF19Q8IW93 802 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SNX8Q9Y5X2 465 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 KDM6BO15054 1643 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 OPLAHO14841 1288 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 FGF10O15520 208 aaPredicted RBP13.3□□□□□ -0.28
HLCS-201ENST00000336648 NDUFB5O43674 189 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 PAX7P23759 505 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 NEDD8Q15843 81 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ZNF398Q8TD17 642 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 STK32AQ8WU08 396 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ATL1Q8WXF7 558 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ENTPD4Q9Y227 616 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 KPNA5O15131 536 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SSNA1O43805 119 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ZBTB14O43829 449 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 HMGCRP04035 888 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 CCDC166P0CW27 439 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 MAPK8P45983 427 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 QPRTQ15274 297 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 DDI2Q5TDH0 399 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 STK32CQ86UX6 486 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 KATNAL2Q8IYT4 538 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 CCDC185Q8N715 623 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 FNIP1Q8TF40 1166 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ATP13A1Q9HD20 1204 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 OSGEPQ9NPF4 335 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ANAPC2Q9UJX6 822 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ZNF222Q9UK12 451 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 TSPAN16Q9UKR8 245 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 FBXL16Q8N461 479 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 NKAPQ8N5F7 415 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ZNF606Q8WXB4 792 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 S100A13Q99584 98 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 APOL2Q9BQE5 337 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 RPS6KA6Q9UK32 745 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ASTN2O75129 1339 aaPredicted RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 NTSP30990 170 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 CDC42P60953 191 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SLC45A4Q5BKX6 768 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SLC27A1Q6PCB7 646 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 PROSER1Q86XN7 944 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 CCDC33Q8N5R6 958 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 KAT2BQ92831 832 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 OPTCQ9UBM4 332 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 PRKAG3Q9UGI9 489 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SGTAO43765 313 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 TFRCP02786 760 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 ALDH9A1P49189 494 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 RPL14P50914 215 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 ZFP28Q8NHY6 868 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 RNF145Q96MT1 663 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 TRIT1Q9H3H1 467 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 PSME2Q9UL46 239 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 H3BN98 237 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 CHADO15335 359 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 KCNH1O95259 989 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 GLI1P08151 1106 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 ITGB6P18564 788 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 POU6F1Q14863 301 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 OSGEPL1Q9H4B0 414 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 PRDM8Q9NQV8 689 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 DMGDHQ9UI17 866 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 SYNPO2Q9UMS6 1093 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 RPL26L1Q9UNX3 145 aaKnown RBP13.29□□□□□ -0.28
HLCS-201ENST00000336648 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
HLCS-201ENST00000336648 QSOX1O00391 747 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ACSM2AQ08AH3 577 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 INSCQ1MX18 579 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 C5orf22Q49AR2 442 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ACSM2BQ68CK6 577 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 BRSK2Q8IWQ3 736 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ZNF75CPQ92670 426 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms