RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SNAPC3Q92966 411 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 ANKRD60Q9BZ19 345 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 IARS2Q9NSE4 1012 aaKnown RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 NXF1Q9UBU9 619 aaKnown RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 RIMS3Q9UJD0 308 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 DLG5Q8TDM6 1919 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PREX2Q70Z35 1606 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 LEUTXA8MZ59 168 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 LAD1O00515 517 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PRKD3O94806 890 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 BMP1P13497 986 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 KELP23276 732 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 NUBP1P53384 320 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 CDH15P55291 814 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PMS2P3Q13401 168 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 BRMS1LQ5PSV4 323 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 ZNF438Q7Z4V0 828 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 GLYCTKQ8IVS8 523 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 JDP2Q8WYK2 163 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 NELL1Q92832 810 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 MAGED4Q96JG8 741 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 TMEM121Q9BTD3 319 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 LHX5Q9H2C1 402 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 SERPINB13Q9UIV8 391 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 SNX13Q9Y5W8 968 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 SNX5Q9Y5X3 404 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 METP08581 1390 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 TRAV20A0A0B4J274 112 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 A0A1B0GTW7 788 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 ZNF487B1APH4 448 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 TYROBPO43914 113 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 NCF2P19878 526 aaPredicted RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 ARNTP27540 789 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 L1CAMP32004 1257 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 RFTN1Q14699 578 aaPredicted RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 FAM47AQ5JRC9 791 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PM20D1Q6GTS8 502 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PRSS42Q7Z5A4 293 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 KIF18BQ86Y91 864 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 ZNF786Q8N393 782 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 UBL4BQ8N7F7 174 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 BEST2Q8NFU1 509 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 KLHL32Q96NJ5 620 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 CCDC106Q9BWC9 280 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 NR2E1Q9Y466 385 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 IPPQ9Y573 584 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PCDHA3Q9Y5H8 950 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 NRCAMQ92823 1304 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 DCAF8L1A6NGE4 600 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 FAM189A1O60320 539 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 SERPINB2P05120 415 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 DLATP10515 647 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 IL12RB1P42701 662 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 STARP49675 285 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 NDST1P52848 882 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 EEF1A1P68104 462 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 SLC25A3Q00325 362 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 FLI1Q01543 452 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 EEF1A2Q05639 463 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 MFSD13AQ14CX5 517 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ZNF181Q2M3W8 571 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 SEL1L2Q5TEA6 688 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 EEF1A1P5Q5VTE0 462 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ANKRD40Q6AI12 368 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ZNF425Q6IV72 752 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ALYREFQ86V81 257 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 CHSY1Q86X52 802 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 GOT1L1Q8NHS2 421 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 RASGRP4Q8TDF6 673 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 PHKBQ93100 1093 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 FATE1Q969F0 183 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ARHGEF26Q96DR7 871 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 EDC3Q96F86 508 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 AHCYL2Q96HN2 611 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 DACH2Q96NX9 599 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 YTHDF1Q9BYJ9 559 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 BRD7Q9NPI1 651 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 TRPC5Q9UL62 973 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 DERAQ9Y315 318 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 FAM155AB1AL88 458 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 KCNQ3O43525 872 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 HSPD1P10809 573 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 SELLP14151 372 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 VAMP1P23763 118 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 CTNNA2P26232 953 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 CD40LGP29965 261 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 UGT2B10P36537 528 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 RECQLP46063 649 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 TPMTP51580 245 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 RTP2Q5QGT7 225 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 GADL1Q6ZQY3 521 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 STXBP4Q6ZWJ1 553 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 IKBIPQ70UQ0 350 aa8.76□□□□□ -1.01
TDP1-201ENST00000335725 ADAT2Q7Z6V5 191 aaKnown RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 SLC44A2Q8IWA5 706 aaPredicted RBP8.76□□□□□ -1.01
TDP1-201ENST00000335725 C4orf33Q8N1A6 199 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms