RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 AP1S3Q96PC3 154 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 TRABDQ9H4I3 376 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 SMAD9O15198 467 aaKnown RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 TBL1XO60907 577 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF16P17020 682 aaPredicted RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 PAX7P23759 505 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 HSD17B2P37059 387 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 CELF1Q92879 486 aaKnown RBP12.88□□□□□ -0.35
KPNA4-201ENST00000334256 RACGAP1Q9H0H5 632 aa12.88□□□□□ -0.35
KPNA4-201ENST00000334256 RBM39Q14498 530 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF808Q8N4W9 903 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FAM92AA1XBS5 289 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FAM91A1Q658Y4 838 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 LSM14AQ8ND56 463 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 AIF1LQ9BQI0 150 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 TIE1P35590 1138 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 GPR15P49685 360 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 COL9A2Q14055 689 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 DRAP1Q14919 205 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 NAB2Q15742 525 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 HIPK3Q9H422 1215 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 LRRC40Q9H9A6 602 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FBRSQ9HAH7 460 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 CNTRLQ7Z7A1 2325 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 TSPAN4O14817 238 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ERAL1O75616 437 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 BCL10O95999 233 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 CASP4P49662 377 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 CRYMQ14894 314 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ADAM32Q8TC27 787 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 TRADDQ15628 312 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 MAGEC3Q8TD91 643 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 KCNJ9Q92806 393 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 RIPOR3Q96MK2 946 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 PNO1Q9NRX1 252 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 OR56A5P0C7T3 313 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 CHN1P15882 459 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 BST2Q10589 180 aaKnown RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 PYDC2Q56P42 97 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ZBTB8BQ8NAP8 495 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ZSCAN5AQ9BUG6 496 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 REV1Q9UBZ9 1251 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ULK1O75385 1050 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 NT5EP21589 574 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.355e-11■□□□□ 10.3
KPNA4-201ENST00000334256 RGS8P57771 180 aaPredicted RBP12.87□□□□□ -0.35
KPNA4-201ENST00000334256 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 ITCHQ96J02 903 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 TMEM120AQ9BXJ8 343 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 DNAJC28Q9NX36 388 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 PSME2Q9UL46 239 aa12.87□□□□□ -0.35
KPNA4-201ENST00000334256 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 H3BNH8 94 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 LDB2O43679 373 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ITGAVP06756 1048 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 KLRC1P26715 233 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 NMT1P30419 496 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 PCYOX1LQ8NBM8 494 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SNF8Q96H20 258 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ERBB4Q15303 1308 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 GCATO75600 419 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SLC2A3P11169 496 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CDH13P55290 713 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 TSNQ15631 228 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF658Q5TYW1 1059 aaPredicted RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF669Q96BR6 464 aaPredicted RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 B4DGG1 531 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SCRN1Q12765 414 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 USP45Q70EL2 814 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms