RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PAPOLAP51003 745 aaKnown RBP23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ANKRD22Q5VYY1 191 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ELMSAN1Q6PJG2 1045 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 BBS7Q8IWZ6 715 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 FAM217AQ8IXS0 508 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ZNF419Q96HQ0 510 aaPredicted RBP23.82■■□□□ 1.4
TSEN54-201ENST00000333213 APOL5Q9BWW9 433 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 NSUN3Q9H649 340 aaKnown RBP23.82■■□□□ 1.4
TSEN54-201ENST00000333213 HELZP42694 1942 aaKnown RBP23.82■■□□□ 1.4
TSEN54-201ENST00000333213 CHKAP35790 457 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 NDST2P52849 883 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 GAD2Q05329 585 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ANKRD20A2Q5SQ80 823 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 FAXCQ5TGI0 409 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ANKRD20A1Q5TYW2 823 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ANKRD20A3Q5VUR7 823 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 TMEM184AQ6ZMB5 413 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 ZNF567Q8N184 647 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 SH3RF2Q8TEC5 729 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 LRRC45Q96CN5 670 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 HMCESQ96FZ2 354 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 TSGA13Q96PP4 275 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 BRD8Q9H0E9 1235 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 SEPT10Q9P0V9 454 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 PAK5Q9P286 719 aa23.82■■□□□ 1.4
TSEN54-201ENST00000333213 MRPS23Q9Y3D9 190 aaKnown RBP23.82■■□□□ 1.4
TSEN54-201ENST00000333213 SHROOM3Q8TF72 1996 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.81■■□□□ 1.4
TSEN54-201ENST00000333213 A0A0A0MRY4 1105 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 PTPN3P26045 913 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 ZBTB17Q13105 803 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 ARHGAP15Q53QZ3 475 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 CCDC13Q8IYE1 715 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 NAT8LQ8N9F0 302 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 TSEN2Q8NCE0 465 aaKnown RBP23.81■■□□□ 1.4
TSEN54-201ENST00000333213 SPATA13Q96N96 652 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 SH3BP1Q9Y3L3 701 aa23.81■■□□□ 1.4
TSEN54-201ENST00000333213 RASA4BC9J798 803 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 ZNF197O14709 1029 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 RASA4O43374 803 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 NUMBP49757 651 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 CDH4P55283 916 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 RABGAP1LQ5R372 815 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 RARS2Q5T160 578 aaKnown RBP23.8■■□□□ 1.4
TSEN54-201ENST00000333213 SYCP2LQ5T4T6 812 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 SYCE2Q6PIF2 218 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 ATPAF2Q8N5M1 289 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 TXLNGYQ9BZA5 131 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 RAB6BQ9NRW1 208 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 TDP1Q9NUW8 608 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 GOLGA6CA6NDK9 693 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 TMEM63AO94886 807 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 GOLGA6DP0CG33 693 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 CCNCP24863 283 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 MAPKAPK2P49137 400 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 BASP1P80723 227 aaKnown RBP23.8■■□□□ 1.4
TSEN54-201ENST00000333213 BBOF1Q8ND07 529 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 PRCCQ92733 491 aaPredicted RBP23.8■■□□□ 1.4
TSEN54-201ENST00000333213 ETNK1Q9HBU6 452 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 GOLGA6AQ9NYA3 693 aa23.8■■□□□ 1.4
TSEN54-201ENST00000333213 LSM7Q9UK45 103 aaKnown RBP23.8■■□□□ 1.4
TSEN54-201ENST00000333213 A0A0D9SEW6 157 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 SOBPA7XYQ1 873 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 PEX11BO96011 259 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 ACVRL1P37023 503 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 ZNF33AQ06730 810 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 TMC3Q7Z5M5 1100 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 ARID3BQ8IVW6 561 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-201ENST00000333213 EFHBQ8N7U6 833 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 PPP2R3CQ969Q6 453 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 FAM129AQ9BZQ8 928 aa23.79■■□□□ 1.4
TSEN54-201ENST00000333213 TTYH1Q9H313 450 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-201ENST00000333213 PRRC2BQ5JSZ5 2229 aaKnown RBP23.79■■□□□ 1.4
TSEN54-201ENST00000333213 J3KR12 359 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 RAMP2O60895 175 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 MORF4L2Q15014 288 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 CNTD1Q8N815 330 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 DDX50Q9BQ39 737 aaKnown RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 FAM107BQ9H098 131 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 DZANK1Q9NVP4 752 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 DONSONQ9NYP3 566 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 IPO11Q9UI26 975 aaKnown RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 A0A1B0GVM2 712 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 TCAF2A6NFQ2 919 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 F5H423 210 aaPredicted RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 CLDN11O75508 207 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 CD68P34810 354 aaPredicted RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 CAV1Q03135 178 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 KCNJ11Q14654 390 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 POLD3Q15054 466 aaPredicted RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 LRIT3Q3SXY7 679 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 GPR149Q86SP6 731 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 PPIL6Q8IXY8 311 aa23.78■■□□□ 1.4
TSEN54-201ENST00000333213 DNAJC17Q9NVM6 304 aaKnown RBP23.78■■□□□ 1.4
TSEN54-201ENST00000333213 CHD5Q8TDI0 1954 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 E2F8A0AVK6 867 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 ZBTB24O43167 697 aaPredicted RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 JCHAINP01591 159 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 HSPA9P38646 679 aaKnown RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 DHX9Q08211 1270 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms