RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CERCAMQ5T4B2 595 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 SLC24A5Q71RS6 500 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 ATP2A3Q93084 1043 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 UTP4Q969X6 686 aaKnown RBP17.77■□□□□ 0.43
DDX28-201ENST00000332395 SKA1Q96BD8 255 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 APOL2Q9BQE5 337 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 UBP1Q9NZI7 540 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 EMCNQ9ULC0 261 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 FAM237BA0A1B0GVD1 139 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 A8MUI8 341 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ATP9BO43861 1147 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 DNAJC6O75061 913 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 PAX7P23759 505 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 HOXC13P31276 330 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 SP3Q02447 781 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 FRG1Q14331 258 aaKnown RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 MBTPS1Q14703 1052 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ANKRD20A4Q4UJ75 823 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 N4BP2L1Q5TBK1 243 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 GRTP1Q5TC63 336 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 C16orf46Q6P387 395 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 TRAF7Q6Q0C0 670 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ARHGAP36Q6ZRI8 547 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 EP400NLQ6ZTU2 488 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 SCN4BQ8IWT1 228 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ARHGAP12Q8IWW6 846 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ATPAF2Q8N5M1 289 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 CNTD1Q8N815 330 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 LINC01599Q8WXQ3 324 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 TSGA13Q96PP4 275 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 TRPV6Q9H1D0 765 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 FBXO6Q9NRD1 293 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 ABI2Q9NYB9 513 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 MYO16Q9Y6X6 1858 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 C2orf71A6NGG8 1288 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 SNNO75324 88 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 HAUS5O94927 633 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 GSRP00390 522 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 CCNCP24863 283 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 NPY2RP49146 381 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ZBTB16Q05516 673 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 MANEALQ5VSG8 457 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 OTOP3Q7RTS5 596 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 USP33Q8TEY7 942 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 MFSD3Q96ES6 412 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 FCRL2Q96LA5 508 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 GLT1D1Q96MS3 346 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 IL22Q9GZX6 179 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 ZNF395Q9H8N7 513 aaPredicted RBP17.76■□□□□ 0.43
DDX28-201ENST00000332395 NMUR1Q9HB89 426 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 DCDC2Q9UHG0 476 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 NUDT5Q9UKK9 219 aa17.76■□□□□ 0.43
DDX28-201ENST00000332395 MAGEB16A2A368 324 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 TRAFD1O14545 582 aaPredicted RBP17.75■□□□□ 0.43
DDX28-201ENST00000332395 FGF10O15520 208 aaPredicted RBP17.75■□□□□ 0.43
DDX28-201ENST00000332395 HTR7P34969 479 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 PPP2R5DQ14738 602 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 DBN1Q16643 649 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 FASTKD1Q53R41 847 aaKnown RBP17.75■□□□□ 0.43
DDX28-201ENST00000332395 MAP3K21Q5TCX8 1036 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 NAPEPLDQ6IQ20 393 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 ARID3BQ8IVW6 561 aaPredicted RBP17.75■□□□□ 0.43
DDX28-201ENST00000332395 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 URGCPQ8TCY9 931 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 HHIPL1Q96JK4 782 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 RBBP8Q99708 897 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 ZCWPW1Q9H0M4 648 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 CATSPERBQ9H7T0 1116 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 KCNK4Q9NYG8 393 aa17.75■□□□□ 0.43
DDX28-201ENST00000332395 A0A1W2PQH9 124 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 TMEM189-UBE2V1I3L0A0 370 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 CACNG3O60359 315 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 PLIN3O60664 434 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 OAZ2O95190 189 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 TYK2P29597 1187 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 OR1G1P47890 313 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 CDH17Q12864 832 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 STX3Q13277 289 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 NAA25Q14CX7 972 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 ZCCHC23Q6ZST2 131 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 STRA8Q7Z7C7 330 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDX28-201ENST00000332395 LZTR1Q8N653 840 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 NSMCE1Q8WV22 266 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 AGAP2Q99490 1192 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 C20orf27Q9GZN8 174 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 CHRAC1Q9NRG0 131 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 TBC1D13Q9NVG8 400 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 LNPEPQ9UIQ6 1025 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
DDX28-201ENST00000332395 HNRNPCL1O60812 293 aaKnown RBP17.74■□□□□ 0.43
DDX28-201ENST00000332395 TPH1P17752 444 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 SPRP35270 261 aaPredicted RBP17.74■□□□□ 0.43
DDX28-201ENST00000332395 TTC3P53804 2025 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 HSP90AA5PQ58FG0 334 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 PPM1JQ5JR12 505 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 ARTNQ5T4W7 220 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms