RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 KIAA1324Q6UXG2 1013 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 SLC36A4Q6YBV0 504 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 KBTBD6Q86V97 674 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 FAM72BQ86X60 149 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 PSTKQ8IV42 348 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 OR52K2Q8NGK3 314 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 OR2T3Q8NH03 318 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 RLN3Q8WXF3 142 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 MRGPRX3Q96LB0 322 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 MAGEB5Q9BZ81 275 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 UVRAGQ9P2Y5 699 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 ANAPC7Q9UJX3 599 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 NENFQ9UMX5 172 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 THADAQ6YHU6 1953 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 RALGAPA1Q6GYQ0 2036 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 FAM186AA6NE01 2351 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 CREB3O43889 395 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 RETP07949 1114 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 EPHB2P29323 1055 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 MIPP30301 263 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 COPAP53621 1224 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 GNA12Q03113 381 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF252P-AS1Q0IIN9 211 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 MAP7D1Q3KQU3 841 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 PLK5Q496M5 336 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 SPDYCQ5MJ68 293 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 PYROXD2Q8N2H3 581 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 FAM160A2Q8N612 972 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-201ENST00000332345 ARFGAP1Q8N6T3 406 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF366Q8N895 744 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 TC2NQ8N9U0 490 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 MYO19Q96H55 970 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 SPON2Q9BUD6 331 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 MKRN2Q9H000 416 aaKnown RBP14.37□□□□□ -0.11
LIMS1-201ENST00000332345 DUSP15Q9H1R2 295 aaPredicted RBP14.37□□□□□ -0.11
LIMS1-201ENST00000332345 DHX35Q9H5Z1 703 aaKnown RBP14.37□□□□□ -0.11
LIMS1-201ENST00000332345 CATSPERBQ9H7T0 1116 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 ITM2CQ9NQX7 267 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 AP4E1Q9UPM8 1137 aa14.37□□□□□ -0.11
LIMS1-201ENST00000332345 A0A0D9SEW6 157 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 TTC34A8MYJ7 566 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 LRCH4O75427 683 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 TMEM253P0C7T8 217 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 OXTRP30559 389 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 NUMBP49757 651 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF135P52742 658 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-201ENST00000332345 ZBTB16Q05516 673 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 SFSWAPQ12872 951 aaKnown RBP14.36□□□□□ -0.11
LIMS1-201ENST00000332345 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 C9orf64Q5T6V5 341 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 NLRP14Q86W24 1093 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 GPR161Q8N6U8 529 aaKnown RBP14.36□□□□□ -0.11
LIMS1-201ENST00000332345 NIPA2Q8N8Q9 360 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 DCAF4L2Q8NA75 395 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
LIMS1-201ENST00000332345 ARHGEF26Q96DR7 871 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 PANX2Q96RD6 677 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 SLC6A17Q9H1V8 727 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 MAGEH1Q9H213 219 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 DNAI1Q9UI46 699 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 HPCAL4Q9UM19 191 aa14.36□□□□□ -0.11
LIMS1-201ENST00000332345 EP300Q09472 2414 aaPredicted RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 PLXND1Q9Y4D7 1925 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 WASH4PA8MWX3 477 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 CBX4O00257 560 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 FGF10O15520 208 aaPredicted RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 DAPK3O43293 454 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 ATP9BO43861 1147 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 SIN3BO75182 1162 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 NDUFS2O75306 463 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 DNTTP04053 509 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 STK19P49842 368 aaPredicted RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 TPI1P60174 286 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 SEMA3BQ13214 749 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 POLD3Q15054 466 aaPredicted RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 DLG2Q15700 870 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 HADHQ16836 314 aaKnown RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
LIMS1-201ENST00000332345 IL31Q6EBC2 164 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 RETSATQ6NUM9 610 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 CCDC170Q8IYT3 715 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 SH2D3CQ8N5H7 860 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 ATP11CQ8NB49 1132 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 OR7D4Q8NG98 312 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 PTPRN2Q92932 1015 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 BTBD6Q96KE9 485 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 PSMB7Q99436 277 aa14.35□□□□□ -0.11
LIMS1-201ENST00000332345 SNRNP25Q9BV90 132 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms