RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 DCDC2Q9UHG0 476 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 ERI2A8K979 691 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 IRAK2O43187 625 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 HNRNPCL1O60812 293 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ELNP15502 786 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 CPA2P48052 419 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 STXBP5Q5T5C0 1151 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 GRTP1Q5TC63 336 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 RFWD3Q6PCD5 774 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ATG14Q6ZNE5 492 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 RINLQ6ZS11 566 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 TREML1Q86YW5 311 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 THEM5Q8N1Q8 247 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 SPATA22Q8NHS9 363 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 CASP10Q92851 521 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF778Q96MU6 729 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 DENND2DQ9H6A0 471 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 CAB39LQ9H9S4 337 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 COL4A4P53420 1690 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 CA12O43570 354 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 PAGE1O75459 146 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 WFS1O76024 890 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 PROCP04070 461 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ESRRAP11474 423 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 CALB2P22676 271 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF135P52742 658 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 EIF4EBP2Q13542 120 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 DLG2Q15700 870 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 TEDDM1Q5T9Z0 273 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 BTBD8Q5XKL5 378 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 SPATA2LQ8IUW3 424 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 PLD6Q8N2A8 252 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 SUSD3Q96L08 255 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 VAT1Q99536 393 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 WWP1Q9H0M0 922 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 OSBPL2Q9H1P3 480 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 C20orf96Q9NUD7 363 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 NDFIP2Q9NV92 336 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 ARHGEF38Q9NXL2 777 aa15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-201ENST00000331433 GYG2O15488 501 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 PEX11AO75192 247 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ENTPD5O75356 428 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 MOCS2O96007 188 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 MT-CYBP00156 380 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 NMBRP28336 390 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 LIMK2P53671 638 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 PPP2R5DQ14738 602 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 CCSAPQ6IQ19 270 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 KCNMB4Q86W47 210 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF280BQ86YH2 543 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ARHGAP12Q8IWW6 846 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 KLHDC9Q8NEP7 349 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ACVR1CQ8NER5 493 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TACO1Q9BSH4 297 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TUBB6Q9BUF5 446 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TAS2R1Q9NYW7 299 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 DNAJC16Q9Y2G8 782 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 DIAPH2O60879 1101 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ARRB2P32121 409 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SPRP35270 261 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SLC1A6P48664 564 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 YWHAHQ04917 246 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 MAPRE1Q15691 268 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SDHAF4Q5VUM1 108 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SCD5Q86SK9 330 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SCN4BQ8IWT1 228 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 SCML4Q8N228 414 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ATPAF2Q8N5M1 289 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 RILPQ96NA2 401 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 IL22Q9GZX6 179 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 NMUR1Q9HB89 426 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 IARS2Q9NSE4 1012 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 ABCC13Q9NSE7 274 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 MCM8Q9UJA3 840 aa15.16■□□□□ 0.02
CLCNKA-201ENST00000331433 CAPN14A8MX76 684 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 GSC2O15499 205 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 RPLP2P05387 115 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 ENO1P06733 434 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 ALDH18A1P54886 795 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 NKX3-2P78367 333 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 IRF9Q00978 393 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 RCN2Q14257 317 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 TRIM71Q2Q1W2 868 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 KCNV2Q8TDN2 545 aa15.15■□□□□ 0.02
CLCNKA-201ENST00000331433 NSMCE1Q8WV22 266 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms