RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FBXW11Q9UKB1 542 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 SHOC2Q9UQ13 582 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 E9PAM4 449 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 TBL1XO60907 577 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 CALRP27797 417 aaKnown RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ELK3P41970 407 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 PTPN9P43378 593 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 PSRC1Q6PGN9 363 aaPredicted RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 PQLC3Q8N755 202 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 PPP1R14CQ8TAE6 165 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 IGHA2P01877 340 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 RHOCP08134 193 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 NFKB1P19838 968 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 GABRB2P47870 512 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 HADHBP55084 474 aaKnown RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 SESN3P58005 492 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 XRCC4Q13426 336 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 LRRC38Q5VT99 294 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 SMG7Q92540 1137 aaKnown RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 MAN1C1Q9NR34 630 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 NOP53Q9NZM5 478 aaKnown RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 TCP11X1B4DZS4 312 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 CXCR3P49682 368 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ANKRD20A2Q5SQ80 823 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ANKRD20A1Q5TYW2 823 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ANKRD20A3Q5VUR7 823 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 DUPD1Q68J44 220 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 FAM47EQ6ZV65 393 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 DDX53Q86TM3 631 aaKnown RBP16.24■□□□□ 0.19
PDGFB-201ENST00000331163 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 ARMC2Q8NEN0 867 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 OR52K1Q8NGK4 314 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 FAM129AQ9BZQ8 928 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
PDGFB-201ENST00000331163 DOCK6Q96HP0 2047 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 HAPLN1P10915 354 aaPredicted RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 MX2P20592 715 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 MSH2P43246 934 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 BMPR2Q13873 1038 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 NOMO1Q15155 1222 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 LRRC73Q5JTD7 316 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 RARS2Q5T160 578 aaKnown RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 IFT43Q96FT9 208 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 AFF4Q9UHB7 1163 aaKnown RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 KCNU1A8MYU2 1149 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 METTL18O95568 372 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 COG7P83436 770 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 TAF11Q15544 211 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 FBXL22Q6P050 247 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 ARHGAP18Q8N392 663 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 BBOF1Q8ND07 529 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 PSMG2Q969U7 264 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 TCEAL4Q96EI5 215 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 TRIM62Q9BVG3 475 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 NKX2-4Q9H2Z4 354 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 SPATS2LQ9NUQ6 558 aaKnown RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 C15orf41Q9Y2V0 281 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 HS3ST4Q9Y661 456 aa16.23■□□□□ 0.19
PDGFB-201ENST00000331163 ZFP37Q9Y6Q3 630 aaPredicted RBP16.23■□□□□ 0.19
PDGFB-201ENST00000331163 ZBTB24O43167 697 aaPredicted RBP16.22■□□□□ 0.19
PDGFB-201ENST00000331163 COCHO43405 550 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 MGAT1P26572 445 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 ACVRL1P37023 503 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 COPS2P61201 443 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 ACAP1Q15027 740 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 THEMIS2Q5TEJ8 643 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 ALLCQ8N6M5 410 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 NSRP1Q9H0G5 558 aaKnown RBP16.22■□□□□ 0.19
PDGFB-201ENST00000331163 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 PAK5Q9P286 719 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 RASA4BC9J798 803 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 STK25O00506 426 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 RASA4O43374 803 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 MGRN1O60291 552 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 FGFR3P22607 806 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 STIP1P31948 543 aaKnown RBP16.22■□□□□ 0.19
PDGFB-201ENST00000331163 PTGIRP43119 386 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 EFTUD2Q15029 972 aaKnown RBP eCLIP16.22■□□□□ 0.198e-13■■■■□ 20.9
PDGFB-201ENST00000331163 AGBL2Q5U5Z8 902 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 FICDQ9BVA6 458 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 CRISPLD2Q9H0B8 497 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 RNF38Q9H0F5 515 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 CWH43Q9H720 699 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 A0A0U1RQS6 177 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 CCDC195A0A1B0GUA6 201 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 J3KR12 359 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 MROH9Q5TGP6 573 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 PPIL6Q8IXY8 311 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 NPWQ8N729 165 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms