RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TK2O00142 265 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 VWA5AO00534 786 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDH2P19022 906 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 HDCP19113 662 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ARL2P36404 184 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 GPD2P43304 727 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 NR1H2P55055 460 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CNTN2Q02246 1040 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 PRAMEF18Q5VWM3 479 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 DNAAF3Q8N9W5 541 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ACVR1CQ8NER5 493 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CLEC4CQ8WTT0 213 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 PDCD6IPQ8WUM4 868 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 EPS15L1Q9UBC2 864 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 RSL24D1Q9UHA3 163 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 A0A096LPK6 155 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 KCNK1O00180 336 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PHGDHO43175 533 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 TPST1O60507 370 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PIGNO95427 931 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PSMB4P28070 264 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 NDST1P52848 882 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 NAGLUP54802 743 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ANKDD1AQ495B1 522 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ALKBH2Q6NS38 261 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 EPGNQ6UW88 154 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 C16orf89Q6UX73 402 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CLVS1Q8IUQ0 354 aaPredicted RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 MCRS1Q96EZ8 462 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 RBM38Q9H0Z9 239 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 TASP1Q9H6P5 420 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 MOCS1Q9NZB8 636 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RIMS3Q9UJD0 308 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SLC39A10Q9ULF5 831 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PCDHB11Q9Y5F2 797 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CEPT1Q9Y6K0 416 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 TPH1P17752 444 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CYP3A5P20815 502 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ME2P23368 584 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 GOLGA7BQ2TAP0 167 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 MTX3Q5HYI7 312 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 C1orf127Q8N9H9 656 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RDM1Q8NG50 284 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ARHGAP9Q9BRR9 750 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 LHX5Q9H2C1 402 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ALG2Q9H553 416 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SUDS3Q9H7L9 328 aaPredicted RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 ZNF277Q9NRM2 450 aaPredicted RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 MKS1Q9NXB0 559 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RRN3Q9NYV6 651 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SIX4Q9UIU6 781 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RAB26Q9ULW5 256 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 C7orf72A4D263 438 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PLOD2O00469 737 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 MSCO60682 206 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PLA2G6O60733 806 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 GOT1P17174 413 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CKMT2P17540 419 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 EMP3P54852 163 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 NAA20P61599 178 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CBX3Q13185 183 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PITRM1Q5JRX3 1037 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PMF1Q6P1K2 205 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 GK5Q6ZS86 529 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ANKRD23Q86SG2 305 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 TP53INP2Q8IXH6 220 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 AHI1Q8N157 1196 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 OR52K1Q8NGK4 314 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 LRRC39Q96DD0 335 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ACO2Q99798 780 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 OMDQ99983 421 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RPF1Q9H9Y2 349 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 UBP1Q9NZI7 540 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SYNPO2Q9UMS6 1093 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ZNF510Q9Y2H8 683 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 KIAA1217Q5T5P2 1943 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 BCLAF3A2AJT9 711 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 RGSL1A5PLK6 1076 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ICMTO60725 284 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 LILRB3O75022 631 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 CCDC166P0CW27 439 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SETSIPP0DME0 302 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 LCP1P13796 627 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 TGM2P21980 687 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 PTK2BQ14289 1009 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 SEL1L3Q68CR1 1132 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 STYK1Q6J9G0 422 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ZNF554Q86TJ5 538 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 ACOT1Q86TX2 421 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 FAM131BQ86XD5 332 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 RBM12BQ8IXT5 1001 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 KBTBD7Q8WVZ9 684 aa8.04□□□□□ -1.12
VMA21-201ENST00000330374 NDRG1Q92597 394 aaKnown RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 FRMD8Q9BZ67 464 aaPredicted RBP8.04□□□□□ -1.12
VMA21-201ENST00000330374 ILKAPQ9H0C8 392 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms