RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 TLE3Q04726 772 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 PLCB4Q15147 1175 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 ARL13AQ5H913 290 aaPredicted RBP3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 ZNF449Q6P9G9 518 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 TMEM88Q6PEY1 159 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 FJX1Q86VR8 437 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 DGKHQ86XP1 1220 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 CAMK1DQ8IU85 385 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 OR4N4Q8N0Y3 316 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 RFLNBQ8N5W9 214 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 TIFAQ96CG3 184 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 IL25Q9H293 177 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 STARD7Q9NQZ5 370 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 VWA5AO00534 786 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 NTSR2O95665 410 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 ALDOAP04075 364 aaKnown RBP3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 SLC5A1P13866 664 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 PRIM2P49643 509 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 TMPRSS3P57727 454 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 TAS2R50P59544 299 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 ILF3Q12906 894 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 AAK1Q2M2I8 961 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 KIF19Q2TAC6 998 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 ARL13BQ3SXY8 428 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 ERAP2Q6P179 960 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 TMEM71Q6P5X7 295 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 NEXN-AS1Q8NBZ9 246 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 CMASQ8NFW8 434 aaPredicted RBP3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 OR14A16Q8NHC5 309 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 BRI3BPQ8WY22 251 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 DUX5Q96PT3 197 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 FRMD8Q9BZ67 464 aaPredicted RBP3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 OCIAD1Q9NX40 245 aa3.33□□□□□ -1.88
CBX3P1-201ENST00000325243 CYP3A7-CYP3A51PA0A087WV96 503 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 FAM234BA2RU67 622 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 STMND1H3BQB6 276 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 GLP2RO95838 553 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 CYP3A4P08684 503 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 F7P08709 466 aaPredicted RBP3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 CYP3A7P24462 503 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 ADPRHP54922 357 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 FOXL2P58012 376 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 BNC1Q01954 994 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 TRAF2Q12933 501 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 RBM39Q14498 530 aaKnown RBP3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 ZNF284Q2VY69 593 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 CCDC25Q86WR0 208 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 LRRC57Q8N9N7 239 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 FAM216AQ8WUB2 273 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 TAF15Q92804 592 aaKnown RBP eCLIP3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 IGSF21Q96ID5 467 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 NECTIN3Q9NQS3 549 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 DONSONQ9NYP3 566 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 RAI2Q9Y5P3 530 aa3.32□□□□□ -1.88
CBX3P1-201ENST00000325243 SERINC4A6NH21 518 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 MCIDASD6RGH6 385 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 BMPR1BO00238 502 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 LDB2O43679 373 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 FGF18O76093 207 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 ATF3P18847 181 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 GNLYP22749 145 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 CHRNA5P30532 468 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 THPOP40225 353 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 STAT1P42224 750 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 RPL15P61313 204 aaKnown RBP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 TUBA1BP68363 451 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 ZBTB16Q05516 673 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 IFIT5Q13325 482 aaKnown RBP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 SLC39A14Q15043 492 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 SF3B4Q15427 424 aaKnown RBP eCLIP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 HLFQ16534 295 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 ARL6IP4Q66PJ3 421 aaKnown RBP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 ANKRD40Q6AI12 368 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 HIBCHQ6NVY1 386 aaPredicted RBP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 AAGABQ6PD74 315 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 TRABD2AQ86V40 505 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 TXLNBQ8N3L3 684 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 BICD2Q8TD16 824 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 WBP2Q969T9 261 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 SORBS1Q9BX66 1292 aaKnown RBP3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 KLHL31Q9H511 634 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 SLC52A1Q9NWF4 448 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 SLC4A4Q9Y6R1 1079 aa3.31□□□□□ -1.88
CBX3P1-201ENST00000325243 PCDH17O14917 1159 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 KIF3BO15066 747 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 KCNJ13O60928 360 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 SOX30O94993 753 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 CER1O95813 267 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 ANXA6P08133 673 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 HARSP12081 509 aaKnown RBP3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 PPP3CCP48454 512 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 AMTP48728 403 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 CXCR3P49682 368 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 NUDT6P53370 316 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 RHAGQ02094 409 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 PMS2P11Q13670 270 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 GRM4Q14833 912 aa3.3□□□□□ -1.88
CBX3P1-201ENST00000325243 SLC35G1Q2M3R5 365 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms