RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	EEF1B2	P24534	225 aa	Known RBP	12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	SLC5A3	P53794	718 aa		12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	AP2B1	P63010	937 aa		12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	SOX4	Q06945	474 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	NOG	Q13253	232 aa		12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	TOP6BL	Q8N6T0	577 aa		12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	GMIP	Q9P107	970 aa		12.06	□□□□□ -0.48
DDR1-223	ENST00000324771	ATP6AP2	A0A1C7CYW4	349 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	SH3BGRL	O75368	114 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	ATP6AP2	O75787	350 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	SEC24D	O94855	1032 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	HMOX2	P30519	316 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CXCR3	P49682	368 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	COPA	P53621	1224 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	USP4	Q13107	963 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MTFR1	Q15390	333 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MRNIP	Q6NTE8	343 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	ARHGAP18	Q8N392	663 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MPP5	Q8N3R9	675 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	FNIP1	Q8TF40	1166 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	PEBP4	Q96S96	227 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CDYL	Q9Y232	598 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	GIT1	Q9Y2X7	761 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	NRP1	O14786	923 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	ANP32D	O95626	131 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CD151	P48509	253 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CAPRIN1	Q14444	709 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TAC4	Q86UU9	113 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CCNJL	Q8IV13	435 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	KCTD4	Q8WVF5	259 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MCRS1	Q96EZ8	462 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	EFHD1	Q9BUP0	239 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	STYXL1	Q9Y6J8	313 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	PMM2	O15305	246 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	RANBP1	P43487	201 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	DLG2	Q15700	870 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	FUT11	Q495W5	492 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	GALNTL6	Q49A17	601 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TCHHL1	Q5QJ38	904 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TIGD7	Q6NT04	549 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	IFNL1	Q8IU54	200 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TDRD5	Q8NAT2	981 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TSPAN17	Q96FV3	270 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CAPNS2	Q96L46	248 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	TBL1Y	Q9BQ87	522 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	KDM4C	Q9H3R0	1056 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	NMRAL1	Q9HBL8	299 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	SCUBE2	Q9NQ36	999 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	PIGV	Q9NUD9	493 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	SLC4A7	Q9Y6M7	1214 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	COL1A2	P08123	1366 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MYADML2	A6NDP7	307 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	GLP2R	O95838	553 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	EDNRB	P24530	442 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	AGAP9	Q5VTM2	703 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MSL3	Q8N5Y2	521 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	RNF217	Q8TC41	542 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	ABCG8	Q9H221	673 aa		12.05	□□□□□ -0.48
DDR1-223	ENST00000324771	MOXD2P	A6NHM9	499 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	C2orf81	A6NN90	581 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ANGPT2	O15123	496 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	SEPT4	O43236	478 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	TRIM13	O60858	407 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	NOL3	O60936	208 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	PIGN	O95427	931 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ITGA2B	P08514	1039 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	UBTFL6	P0CB48	400 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	MSX2	P35548	267 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CHRNA4	P43681	627 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	GALNT3	Q14435	633 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	SEL1L3	Q68CR1	1132 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CLEC20A	Q6ZU45	233 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ALYREF	Q86V81	257 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ZNF567	Q8N184	647 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CYP2S1	Q96SQ9	504 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	FAM96A	Q9H5X1	160 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ENTPD7	Q9NQZ7	604 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	PDLIM7	Q9NR12	457 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ADAMTS5	Q9UNA0	930 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771		H7C4K7	107 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	AP3B1	O00203	1094 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	KATNA1	O75449	491 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	TOP3B	O95985	862 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CCND3	P30281	292 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	KRT33B	Q14525	404 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CYTH1	Q15438	398 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	SCIMP	Q6UWF3	145 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	STRADA	Q7RTN6	431 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	DEFB107A	Q8IZN7	70 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	DCUN1D1	Q96GG9	259 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	AGO3	Q9H9G7	860 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ZNF358	Q9NW07	568 aa		12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	CASQ2	O14958	399 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-223	ENST00000324771	ENTPD5	O75356	428 aa		12.04	□□□□□ -0.48

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