RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PERM1Q5SV97 790 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CMASQ8NFW8 434 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 ACTRT2Q8TDY3 377 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 SIK2Q9H0K1 926 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 MINDY3Q9H8M7 445 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 GGA3Q9NZ52 723 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 MAST2Q6P0Q8 1798 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 OGTO15294 1046 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PTGER2P43116 358 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 KPNA1P52294 538 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 C1orf127Q8N9H9 656 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PCDH12Q9NPG4 1184 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 VWA5AO00534 786 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 IL1RL1Q01638 556 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 TAP1Q03518 808 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 MTA1Q13330 715 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PABPC1LQ4VXU2 614 aaKnown RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 FSTL4Q6MZW2 842 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 SAPCD2Q86UD0 394 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 RNF34Q969K3 372 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 HAPLN3Q96S86 360 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 FAM49AQ9H0Q0 323 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-201ENST00000318607 NMRAL1Q9HBL8 299 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 ZDHHC2Q9UIJ5 367 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 ZNF232Q9UNY5 417 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CDY2AQ9Y6F7 541 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 CDY1Q9Y6F8 540 aa14.49□□□□□ -0.09
PABPC1-201ENST00000318607 PLSCR1O15162 318 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 SPAG6O75602 509 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 LSM8O95777 96 aaKnown RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 THRAP10827 490 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 GARSP41250 739 aaKnown RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 ZNF143P52747 638 aaPredicted RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 ESRRGP62508 458 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 BNIP3Q12983 259 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 PPP1R3AQ16821 1122 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 NBPF12Q5TAG4 269 aaPredicted RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 AAGABQ6PD74 315 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 UBR7Q8N806 425 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 HTR3CQ8WXA8 447 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 SEPHS2Q99611 448 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 FERMT1Q9BQL6 677 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 NRBP2Q9NSY0 501 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 CACNG4Q9UBN1 327 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 TRIM13O60858 407 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 SNNO75324 88 aaPredicted RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 VAPBO95292 243 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 TFEBP19484 476 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 MAGP20916 626 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 NDST2P52849 883 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 LSM3P62310 102 aaKnown RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 TRAF2Q12933 501 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 SPDYE2Q495Y8 402 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 PRDM12Q9H4Q4 367 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 PTTG2Q9NZH5 202 aa14.48□□□□□ -0.09
PABPC1-201ENST00000318607 RSL24D1Q9UHA3 163 aaKnown RBP14.48□□□□□ -0.09
PABPC1-201ENST00000318607 A0A1W2PPW3 197 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 PPEF2O14830 753 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 ZSCAN9O15535 394 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 TSPAN3O60637 253 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 NCAM1P13591 858 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 ACAT1P24752 427 aaKnown RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 ABCD1P33897 745 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 DPP6P42658 865 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 NAMPTP43490 491 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CDH13P55290 713 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 GNA12Q03113 381 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CAPRIN1Q14444 709 aaKnown RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 PCSK7Q16549 785 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 SLC41A1Q8IVJ1 513 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 KCTD17Q8N5Z5 321 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CNDP1Q96KN2 507 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 TRPC5Q9UL62 973 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 PCDHA11Q9Y5I1 949 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 C7orf72A4D263 438 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CCNT2O60583 730 aaKnown RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 POLBP06746 335 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 IL4RP24394 825 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 TPD52P55327 224 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 SNRPFP62306 86 aaKnown RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 ITGADQ13349 1161 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 SNAPC2Q13487 334 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 MAPK11Q15759 364 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 KBTBD6Q86V97 674 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 WDR49Q8IV35 697 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 GAB3Q8WWW8 586 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 JADE3Q92613 823 aa14.47□□□□□ -0.09
PABPC1-201ENST00000318607 RMND5BQ96G75 393 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 FCRL3Q96P31 734 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 NAA50Q9GZZ1 169 aaKnown RBP14.47□□□□□ -0.09
PABPC1-201ENST00000318607 CDH19Q9H159 772 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms