RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 SEMA4DQ92854 862 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 APOLD1Q96LR9 279 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 FZD4Q9ULV1 537 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 CA5BQ9Y2D0 317 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 COQ4Q9Y3A0 265 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 ENTPD2Q9Y5L3 495 aa13.68□□□□□ -0.22
SYCN-201ENST00000318438 SPTBN1Q01082 2364 aaKnown RBP13.68□□□□□ -0.22
SYCN-201ENST00000318438 LATO43561 262 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 RNASEH1O60930 286 aaKnown RBP13.67□□□□□ -0.22
SYCN-201ENST00000318438 ATP5BP06576 529 aaKnown RBP13.67□□□□□ -0.22
SYCN-201ENST00000318438 FAM200BP0CF97 657 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 ADORA2BP29275 332 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 MAT2AP31153 395 aaKnown RBP13.67□□□□□ -0.22
SYCN-201ENST00000318438 SLC8A1P32418 973 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 PSMD8P48556 350 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 INHBCP55103 352 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
SYCN-201ENST00000318438 TGIF1Q15583 401 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 CAMK4Q16566 473 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 TBR1Q16650 682 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 CLEC20AQ6ZU45 233 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 TADA2BQ86TJ2 420 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 IQCHQ86VS3 1027 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 FAM217AQ8IXS0 508 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 TTC39CQ8N584 583 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYCN-201ENST00000318438 IFI44Q8TCB0 444 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 ARRDC3Q96B67 414 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 MYO19Q96H55 970 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 NT5C1AQ9BXI3 368 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 SLC25A18Q9H1K4 315 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 CENPEQ02224 2701 aa13.67□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3DA0A087WVF3 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3IA0A087WXS9 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3EA0A087X179 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3KA0A087X1G2 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3FA6NER0 549 aaPredicted RBP13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3LB9A6J9 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3HP0C7X1 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 THEGLP0DJG4 465 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 RALAP11233 206 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 CD58P19256 250 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 CLCA4Q14CN2 919 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 POM121L1PQ3SYA9 428 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 MPPE1Q53F39 396 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3GQ6DHY5 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3CQ6IPX1 549 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 KIAA0907Q7Z7F0 614 aaPredicted RBP13.66□□□□□ -0.22
SYCN-201ENST00000318438 TBC1D3Q8IZP1 549 aaPredicted RBP13.66□□□□□ -0.22
SYCN-201ENST00000318438 ZNF276Q8N554 614 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 WFDC5Q8TCV5 224 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 LRRC4CQ9HCJ2 640 aa13.66□□□□□ -0.22
SYCN-201ENST00000318438 SLC12A8A0AV02 714 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 CASC3O15234 703 aaKnown RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 PMM2O15305 246 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 NOBOXO60393 691 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 MAGEC1O60732 1142 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 GNA14O95837 355 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 GOT1P17174 413 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 CD70P32970 193 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 FMO5P49326 533 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 SGSHP51688 502 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 KIF11P52732 1056 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 CYP4F2P78329 520 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 STAT4Q14765 748 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 HNRNPA1L2Q32P51 320 aaKnown RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 C9orf64Q5T6V5 341 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 CRTC1Q6UUV9 634 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 SND1Q7KZF4 910 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYCN-201ENST00000318438 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 CLSTN2Q9H4D0 955 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 PNPLA8Q9NP80 782 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 CISHQ9NSE2 258 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 MARCH2Q9P0N8 246 aa13.65□□□□□ -0.22
SYCN-201ENST00000318438 SPENQ96T58 3664 aaKnown RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
SYCN-201ENST00000318438 P4HA2O15460 535 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 PIAS2O75928 621 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 NEBLO76041 1014 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 ALPPL2P10696 532 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 PSEN1P49768 467 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 STX17P56962 302 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 OVGP1Q12889 678 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 CUL2Q13617 745 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 CDKN3Q16667 212 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 RBM44Q6ZP01 1051 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 TRIM59Q8IWR1 403 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 WDR36Q8NI36 951 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms