RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CCDC14Q49A88 953 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 ARL13AQ5H913 290 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 PITRM1Q5JRX3 1037 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 BORAQ6PGQ7 559 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GPR141Q7Z602 305 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 STRA8Q7Z7C7 330 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 SCUBE3Q8IX30 993 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 CCNYL1Q8N7R7 359 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 MCUQ8NE86 351 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 FBXL8Q96CD0 374 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 APBA2Q99767 749 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 B3GNT5Q9BYG0 378 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 SLC2A11Q9BYW1 496 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 RNF146Q9NTX7 359 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 OLAHQ9NV23 265 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 BARX2Q9UMQ3 279 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 A0A1W2PPW3 197 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 BCLAF3A2AJT9 711 aaKnown RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM221A6NGB7 291 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TRIM13O60858 407 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TIPRLO75663 272 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 BCAS2O75934 225 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ENDOD1O94919 500 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 MT-CO1P00395 513 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CXCL8P10145 99 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CNTFP26441 200 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CCND2P30279 289 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SOX11P35716 441 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 Q6ZNX1 250 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CDKL3Q8IVW4 592 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 LRRC71Q8N4P6 559 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 COLGALT1Q8NBJ5 622 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CCNYQ8ND76 341 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ACMSDQ8TDX5 336 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF669Q96BR6 464 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ISOC1Q96CN7 298 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 MCRS1Q96EZ8 462 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SCYL1Q96KG9 808 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PPP1R16BQ96T49 567 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 MTMR10Q9NXD2 777 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SFMBT1Q9UHJ3 866 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SYNJ2BP-COX16A0A087WUM0 186 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 FAM149AA5PLN7 773 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 G3V2L1 256 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 H3BNH8 94 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 OATP04181 439 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 NPR1P16066 1061 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 UGT1A6P19224 532 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PRDX6P30041 224 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PPARGP37231 505 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 GPD2P43304 727 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SP2Q02086 613 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 GPR107Q5VW38 600 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 FSTL4Q6MZW2 842 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CHST15Q7LFX5 561 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PGAM4Q8N0Y7 254 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PYROXD2Q8N2H3 581 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 RP9Q8TA86 221 aaKnown RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SGF29Q96ES7 293 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 HHIPL1Q96JK4 782 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 RANBP9Q96S59 729 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 APOL2Q9BQE5 337 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 LHX5Q9H2C1 402 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TASP1Q9H6P5 420 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 COX16Q9P0S2 106 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 BCAP29Q9UHQ4 241 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ZDHHC2Q9UIJ5 367 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 HDAC3O15379 428 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PHGDHO43175 533 aaKnown RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PAPSS1O43252 624 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 B4GALT5O43286 388 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 AKAP10O43572 662 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ATE1O95260 518 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ITGB3P05106 788 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TFEBP19484 476 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 TGM2P21980 687 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 PSMB4P28070 264 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 GRIA4P48058 902 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ESRRGP62508 458 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ENPEPQ07075 957 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 CD300CQ08708 224 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 IL31Q6EBC2 164 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 STYK1Q6J9G0 422 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 C16orf87Q6PH81 154 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ZBTB49Q6ZSB9 765 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 RNF149Q8NC42 400 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ARNTL2Q8WYA1 636 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ATG4CQ96DT6 458 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 RTP4Q96DX8 246 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SLC39A3Q9BRY0 314 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 NAA50Q9GZZ1 169 aaKnown RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 EFCAB1Q9HAE3 211 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SLC38A10Q9HBR0 1119 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF302Q9NR11 478 aa9.84□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF70Q9UC06 446 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-202ENST00000318266 SLC39A10Q9ULF5 831 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms