RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FAM71DQ8N9W8 422 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ZDHHC4Q9NPG8 344 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 DNAJC17Q9NVM6 304 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 RNF14Q9UBS8 474 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 VPS28Q9UK41 221 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF487B1APH4 448 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 KCNN4O15554 427 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 SNAP91O60641 907 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 PHF2O75151 1096 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 ADH1CP00326 375 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 VAV1P15498 845 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF135P52742 658 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 SLC7A5Q01650 507 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 GNA12Q03113 381 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 RUNX3Q13761 415 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 C5orf22Q49AR2 442 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 TEX35Q5T0J7 233 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 SYCP2LQ5T4T6 812 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 TTC39BQ5VTQ0 682 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 ERLEC1Q96DZ1 483 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 LRRC19Q9H756 370 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 ATP13A1Q9HD20 1204 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 OBP2AQ9NY56 170 aa15.77■□□□□ 0.12
PDLIM5-202ENST00000318007 COL4A3Q01955 1670 aa15.77■□□□□ 0.11
PDLIM5-202ENST00000318007 TICRRQ7Z2Z1 1910 aa15.77■□□□□ 0.11
PDLIM5-202ENST00000318007 ANTXRLA6NF34 631 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 ANHXE9PGG2 379 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 HTR7P34969 479 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 ETFBP38117 255 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 GARSP41250 739 aaKnown RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 ACBD5Q5T8D3 534 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 IER5LQ5T953 404 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 CHST9Q7L1S5 443 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 TFB1MQ8WVM0 346 aaKnown RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 MAIP1Q8WWC4 291 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 E2F7Q96AV8 911 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 OTUB2Q96DC9 234 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 OLFM3Q96PB7 478 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 TRIM31Q9BZY9 425 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 THEGQ9P2T0 379 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 MYO10Q9HD67 2058 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 TTI1O43156 1089 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 PENKP01210 267 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 RHOXF2BP0C7M4 288 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 MAPKAPK2P49137 400 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 CCNG2Q16589 344 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 UMODL1-AS1Q8N2C9 162 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 SLC44A3Q8N4M1 653 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 TTC13Q8NBP0 860 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 SORCS1Q8WY21 1168 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 ARHGEF2Q92974 986 aaKnown RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 RPL10LQ96L21 214 aaKnown RBP15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 TRIM51Q9BSJ1 452 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 SP110Q9HB58 689 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 HEBP1Q9NRV9 189 aa15.76■□□□□ 0.11
PDLIM5-202ENST00000318007 USP34Q70CQ2 3546 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 ZSCAN5CA6NGD5 496 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 WASH4PA8MWX3 477 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 PPP1R12AO14974 1030 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CHADO15335 359 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TULP3O75386 442 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 GJA4P35212 333 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CTSOP43234 321 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 NR2C2P49116 596 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 GAD2Q05329 585 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TUBB2AQ13885 445 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 PDGFRLQ15198 375 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 GEN1Q17RS7 908 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 HEATR6Q6AI08 1181 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CPA6Q8N4T0 437 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 SLC35B2Q8TB61 432 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CHFRQ96EP1 664 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 FEM1AQ9BSK4 669 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 LRRC1Q9BTT6 524 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TUBB2BQ9BVA1 445 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 IPO11Q9UI26 975 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TBC1D30Q9Y2I9 924 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TCF20Q9UGU0 1960 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 TTC24A2A3L6 582 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 ARHGAP42A6NI28 874 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 RAD51CO43502 376 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 SLU7O95391 586 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 DGKGP49619 791 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 NDST2P52849 883 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 DR1Q01658 176 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 GALNT2Q10471 571 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 NAA30Q147X3 362 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 PDK1Q15118 436 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 OASLQ15646 514 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 FUT11Q495W5 492 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 C8orf74Q6P047 294 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 SETD3Q86TU7 594 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 RNF135Q8IUD6 432 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 LZTR1Q8N653 840 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms