RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C20orf173Q96LM9 149 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 SERHL2Q9H4I8 314 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 RXFP3Q9NSD7 469 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 THAP1Q9NVV9 213 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 MTMR4Q9NYA4 1195 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 AMFRQ9UKV5 643 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.4□□□□□ -1.7
SMCO3-201ENST00000316048 ADAMTSL3P82987 1691 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 IL16Q14005 1332 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 PI4KAP2A4QPH2 592 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 SAC3D1A6NKF1 404 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 LINC00473A8K010 186 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 HNRNPRO43390 633 aaKnown RBP4.4□□□□□ -1.71
SMCO3-201ENST00000316048 AHCYL1O43865 530 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 PEX1O43933 1283 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 TMPRSS11DO60235 418 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 EBLN1P0CF75 366 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 HOXA5P20719 270 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 MMP8P22894 467 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 PRKCHP24723 683 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 PRKG2Q13237 762 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 BMPR2Q13873 1038 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 MEA1Q16626 185 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 RNF144BQ7Z419 303 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 OR52L2PQ8NGH6 319 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 EDC3Q96F86 508 aaKnown RBP4.4□□□□□ -1.71
SMCO3-201ENST00000316048 MMS19Q96T76 1030 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 CLSTN3Q9BQT9 956 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF703Q9H7S9 590 aaPredicted RBP4.4□□□□□ -1.71
SMCO3-201ENST00000316048 BRF2Q9HAW0 419 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 ST3GAL5Q9UNP4 418 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 SH2B3Q9UQQ2 575 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 B3GNT3Q9Y2A9 372 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 PIAS3Q9Y6X2 628 aa4.4□□□□□ -1.71
SMCO3-201ENST00000316048 ITSN1Q15811 1721 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 COL3A1P02461 1466 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 FIBPO43427 364 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PRPH2P23942 346 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PRKAR2BP31323 418 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 STAT6P42226 847 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 JAK3P52333 1124 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 DRG2P55039 364 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 SLC37A1P57057 533 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PDE1CQ14123 709 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 RUNDC3AQ59EK9 446 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 WDR93Q6P2C0 686 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 DENND1BQ6P3S1 775 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 RHOUQ7L0Q8 258 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PEG10Q86TG7 708 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ADGRF3Q8IZF5 1079 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 VPS52Q8N1B4 723 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PDILTQ8N807 584 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ADAMTS15Q8TE58 950 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 CACTINQ8WUQ7 758 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PPP1R10Q96QC0 940 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 EYA3Q99504 573 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 TAOK3Q9H2K8 898 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 SEMA4BQ9NPR2 832 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ARHGEF3Q9NR81 526 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 AURKAIP1Q9NWT8 199 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 CNOT7Q9UIV1 285 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 FZD1Q9UP38 647 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 GPR34Q9UPC5 381 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 AKAP12Q02952 1782 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 USP6P35125 1406 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ANKARQ7Z5J8 1434 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 MON2Q7Z3U7 1717 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 SALL3Q9BXA9 1300 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 IQSEC2Q5JU85 1478 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ANKRD18BA2A2Z9 1011 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 TGFB1I1O43294 461 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 BCAR3O75815 825 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 NXPH3O95157 252 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ALDOAP04075 364 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ARSAP15289 507 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 EPHA8P29322 1005 aaPredicted RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PAFAH1B1P43034 410 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PCP4P48539 62 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 COPB1P53618 953 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 RRS1Q15050 365 aaKnown RBP4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PTPRRQ15256 657 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 SPATA1Q5VX52 437 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 KAZNQ674X7 775 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 KIAA0895LQ68EN5 471 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 NAPEPLDQ6IQ20 393 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 RINLQ6ZS11 566 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 MON1AQ86VX9 555 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 PROKR1Q8TCW9 393 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 ERP27Q96DN0 273 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 KAZALD1Q96I82 304 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 KLQ9UEF7 1012 aa4.39□□□□□ -1.71
SMCO3-201ENST00000316048 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms