RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SRGAP2O75044 1071 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 GFPT2O94808 682 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 PROS1P07225 676 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 NUDT1P36639 197 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 CCT8P50990 548 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 DLG2Q15700 870 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 RETSATQ6NUM9 610 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 TRIM72Q6ZMU5 477 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 XYLT1Q86Y38 959 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 ATP11CQ8NB49 1132 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 IGSF8Q969P0 613 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 HAPLN3Q96S86 360 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 KDM4CQ9H3R0 1056 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 FAM207AQ9NSI2 230 aaPredicted RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 ARHGEF38Q9NXL2 777 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 AJAP1Q9UKB5 411 aaPredicted RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 NEUROG3Q9Y4Z2 214 aa13.04□□□□□ -0.32
CKS2-201ENST00000314355 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
CKS2-201ENST00000314355 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 DNAH14Q0VDD8 3507 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 SLC7A4O43246 635 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 GJB3O75712 270 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 MBD3O95983 291 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 MMEP08473 750 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 CD38P28907 300 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 OR1E1P30953 314 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 SDC4P31431 198 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 SOX5P35711 763 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 STK19P49842 368 aaPredicted RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 CCR5P51681 352 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 CDR2Q01850 454 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 CENPCQ03188 943 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 KRT31Q15323 416 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 STX1AQ16623 288 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 KIF19Q2TAC6 998 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 ARCQ7LC44 396 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 TBCBQ99426 244 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 NAA15Q9BXJ9 866 aaKnown RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 NLRC4Q9NPP4 1024 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 SNX11Q9Y5W9 270 aa13.03□□□□□ -0.32
CKS2-201ENST00000314355 TNRC6BQ9UPQ9 1833 aaKnown RBP13.03□□□□□ -0.32
CKS2-201ENST00000314355 PCNX2A6NKB5 2137 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 MCF2LO15068 1137 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 VILLO15195 856 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 YKT6O15498 198 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 HYAL3O43820 417 aaPredicted RBP13.02□□□□□ -0.33
CKS2-201ENST00000314355 ATP9BO43861 1147 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 ADCY5O95622 1261 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 SPINK2P20155 84 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 ETFBP38117 255 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 GRK6P43250 576 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.33
CKS2-201ENST00000314355 NUMBP49757 651 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 CLCN6P51797 869 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 MYL5Q02045 173 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 UBXN1Q04323 297 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 SLC20A2Q08357 652 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 STAT4Q14765 748 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 C5orf22Q49AR2 442 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 CXorf57Q6NSI4 855 aaKnown RBP13.02□□□□□ -0.33
CKS2-201ENST00000314355 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
CKS2-201ENST00000314355 SH2D3CQ8N5H7 860 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 NT5C3BQ969T7 300 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 SERAC1Q96JX3 654 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 CAMK1GQ96NX5 476 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 SPON2Q9BUD6 331 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 SELENOOQ9BVL4 669 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 PCOLCE2Q9UKZ9 415 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 MSRB2Q9Y3D2 182 aa13.02□□□□□ -0.33
CKS2-201ENST00000314355 ADAMTS9Q9P2N4 1935 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 E9PAM4 449 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 PRNPP04156 253 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 CALB1P05937 261 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 ITGAVP06756 1048 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 KRT3P12035 628 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 GGCXP38435 758 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 COPB1P53618 953 aaKnown RBP13.01□□□□□ -0.33
CKS2-201ENST00000314355 NOMO3P69849 1222 aa13.01□□□□□ -0.33
CKS2-201ENST00000314355 ATP11AP98196 1134 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms