RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 L3MBTL1Q9Y468 752 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 CCT8L1PA6NM43 557 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 TM9SF1O15321 606 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 MFSD11O43934 449 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 TRIM16O95361 564 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 AUHQ13825 339 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 ARMC12Q5T9G4 340 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 GRTP1Q5TC63 336 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 C1orf146Q5VVC0 180 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 OSTM1Q86WC4 334 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 A0A096LPK6 155 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 ESRRBO95718 433 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 CYBAP13498 195 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 L1CAMP32004 1257 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 MAGEA9P43362 315 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 ABCG1P45844 678 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 PCID2Q5JVF3 399 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 RBM23Q86U06 439 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 HJURPQ8NCD3 748 aaPredicted RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 EBNA1BP2Q99848 306 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 BUD23O43709 281 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 AVILO75366 819 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 CUL3Q13618 768 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 TBCCQ15814 346 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 ANGPTL8Q6UXH0 198 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 GLT6D1Q7Z4J2 308 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 IQCKQ8N0W5 287 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 DDX1Q92499 740 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 EXOC2Q96KP1 924 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 CPNE1Q99829 537 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 UNKQ9C0B0 810 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 RAD54BQ9Y620 910 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 MYH8P13535 1937 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 RNASEH1O60930 286 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 GPR32O75388 356 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 STBD1O95210 358 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 RBP1P09455 135 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 VEGFBP49765 207 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 CLNS1AP54105 237 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 HTRA3P83110 453 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 MAPRE2Q15555 327 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 N4BP2L1Q5TBK1 243 aaPredicted RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 C15orf39Q6ZRI6 1047 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 PCDH19Q8TAB3 1148 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 SLC35F5Q8WV83 523 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 PAWRQ96IZ0 340 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 RMDN2Q96LZ7 410 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 SRPK1Q96SB4 655 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 RHOBTB2Q9BYZ6 727 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 CFAP73A6NFT4 308 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 PIRO00625 290 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 CLTBP09497 229 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 NUDT17P0C025 328 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 COL6A1P12109 1028 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 BGNP21810 368 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 POU4F1Q01851 419 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 SPDYAQ5MJ70 313 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 TDRD5Q8NAT2 981 aaKnown RBP13.93□□□□□ -0.18
DDX54-202ENST00000314045 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 HAPLN2Q9GZV7 340 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 MYH4Q9Y623 1939 aa13.93□□□□□ -0.18
DDX54-202ENST00000314045 MYO1DO94832 1006 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 CDC25CP30307 473 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 SERPINB4P48594 390 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 TMCO4Q5TGY1 634 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 SCARA3Q6AZY7 606 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 CCDC126Q96EE4 140 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 RNF112Q9ULX5 631 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 LOC100653049A0A140TA62 436 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 KPNA3O00505 521 aaPredicted RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 SOCS7O14512 581 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 GNGT2O14610 69 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 KRT34O76011 436 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 UNC5AQ6ZN44 842 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 AGMOQ6ZNB7 445 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 RAB42Q8N4Z0 105 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 NIPA2Q8N8Q9 360 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 CERS2Q96G23 380 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ANP32DO95626 131 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 STAU1O95793 577 aaKnown RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 ABHD2P08910 425 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 LRPAP1P30533 357 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms