RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GKP32189 559 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ARF5P84085 180 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 TRIM14Q14142 442 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ARHGAP36Q6ZRI8 547 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 Q6ZVU0 165 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 NPWQ8N729 165 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 TCEAL3Q969E4 200 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 IER2Q9BTL4 223 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 OSBPL2Q9H1P3 480 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 TMEM74BQ9NUR3 256 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 SARDHQ9UL12 918 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-201ENST00000311943 DUSP10Q9Y6W6 482 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ZNF292O60281 2723 aa12.36□□□□□ -0.43
SCFD1-201ENST00000311943 ANKRD62A6NC57 917 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 PATE3B3GLJ2 98 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 CLDN11O75508 207 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 MAP3K6O95382 1288 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 RARAP10276 462 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 P2RY2P41231 377 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 EIF4HQ15056 248 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 PLK5Q496M5 336 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ACCSLQ4AC99 568 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 C9orf64Q5T6V5 341 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 LRRC31Q6UY01 552 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 CEP68Q76N32 757 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 STK40Q8N2I9 435 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 OR6K2Q8NGY2 324 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 FRS2Q8WU20 508 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 GAB3Q8WWW8 586 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 NTAN1Q96AB6 310 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 POLMQ9NP87 494 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 NUP205Q92621 2012 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 THADAQ6YHU6 1953 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ZNF821O75541 412 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 GJB3O75712 270 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ZMPSTE24O75844 475 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ATP5BP06576 529 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SRCP12931 536 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 HOXA6P31267 233 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SLC25A11Q02978 314 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SPEM2Q0P670 501 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SCAPQ12770 1279 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 SDE2Q6IQ49 451 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 MMAAQ8IVH4 418 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 CHST14Q8NCH0 376 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 ACRBPQ8NEB7 543 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 UCMAQ8WVF2 138 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
SCFD1-201ENST00000311943 CWC15Q9P013 229 aaKnown RBP12.35□□□□□ -0.43
SCFD1-201ENST00000311943 GVINP1Q7Z2Y8 2422 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 SYNCRIPO60506 623 aaKnown RBP12.34□□□□□ -0.43
SCFD1-201ENST00000311943 H2AFZP0C0S5 128 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 TNNT1P13805 278 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 TGM1P22735 817 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 AMPD1P23109 780 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 L1CAMP32004 1257 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 ACSL1P33121 698 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 NRLP54845 237 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 GNA12Q03113 381 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-201ENST00000311943 MESDQ14696 234 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 DLG2Q15700 870 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-201ENST00000311943 EFHC2Q5JST6 749 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 H2AFVQ71UI9 128 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 VOPP1Q96AW1 172 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 TBC1D31Q96DN5 1066 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 IQCDQ96DY2 449 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 DESI2Q9BSY9 194 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
SCFD1-201ENST00000311943 TRIM10Q9UDY6 481 aa12.34□□□□□ -0.43
SCFD1-201ENST00000311943 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms