RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 DCDC2Q9UHG0 476 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.39■□□□□ 0.54
SPSB4-201ENST00000310546 INHBBP09529 407 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 RBL1P28749 1068 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 NLRP11P59045 1033 aaKnown RBP18.39■□□□□ 0.54
SPSB4-201ENST00000310546 TRPC3Q13507 836 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 PTK2BQ14289 1009 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 CCDC153Q494R4 210 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 DEPDC1Q5TB30 811 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 CYP2R1Q6VVX0 501 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 NAPRTQ6XQN6 538 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 RP9Q8TA86 221 aaKnown RBP18.39■□□□□ 0.54
SPSB4-201ENST00000310546 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.39■□□□□ 0.54
SPSB4-201ENST00000310546 SGF29Q96ES7 293 aa18.39■□□□□ 0.54
SPSB4-201ENST00000310546 PIH1D1Q9NWS0 290 aaKnown RBP18.39■□□□□ 0.54
SPSB4-201ENST00000310546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 TYK2P29597 1187 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 CDH6P55285 790 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 MCCD1P59942 119 aaPredicted RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 TAP1Q03518 808 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 EBNA1BP2Q99848 306 aaKnown RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 ANKRD60Q9BZ19 345 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 NDEL1Q9GZM8 345 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 CCDC68Q9H2F9 335 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 TPK1Q9H3S4 243 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 ELP3Q9H9T3 547 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 VAPBO95292 243 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 GLDCP23378 1020 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 MIPP30301 263 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 NOMO1Q15155 1222 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 MOGQ16653 247 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 LSM12Q3MHD2 195 aaKnown RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 TANKQ92844 425 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 MXRA8Q9BRK3 442 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 FRMD8Q9BZ67 464 aaPredicted RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 XPNPEP3Q9NQH7 507 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 ATAD3AQ9NVI7 634 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
SPSB4-201ENST00000310546 VPS51Q9UID3 782 aa18.39■□□□□ 0.53
SPSB4-201ENST00000310546 KRBA1A5PL33 1030 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 ZNF701M0R085 212 aaPredicted RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 USP2O75604 605 aaPredicted RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PRKCGP05129 697 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 VGLL4Q14135 290 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 DCAF15Q66K64 600 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 ANKRD26P1Q6NSI1 321 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 TIFABQ6ZNK6 161 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 SIGLEC10Q96LC7 697 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 DHRS1Q96LJ7 313 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 AGAP3Q96P47 875 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 POLR1BQ9H9Y6 1135 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 GNPTGQ9UJJ9 305 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PCDHB12Q9Y5F1 795 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PSAT1Q9Y617 370 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 ERBB2P04626 1255 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 ICAM1P05362 532 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 C8BP07358 591 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PABPC1P11940 636 aaKnown RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 RCVRNP35243 200 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PCYT1AP49585 367 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 BAATQ14032 418 aaPredicted RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 RAB39AQ14964 217 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 TREML2Q5T2D2 321 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 GALNT18Q6P9A2 607 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 HERC6Q8IVU3 1022 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 PCDH20Q8N6Y1 951 aaKnown RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 CLEC4DQ8WXI8 215 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 EFCAB1Q9HAE3 211 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.38■□□□□ 0.53
SPSB4-201ENST00000310546 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 ERGIC3Q9Y282 383 aa18.38■□□□□ 0.53
SPSB4-201ENST00000310546 CYP2C9P11712 490 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 MX2P20592 715 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 S100A1P23297 94 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 JAK1P23458 1154 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 NEDD8Q15843 81 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 STXBP5Q5T5C0 1151 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 EEPD1Q7L9B9 569 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 ZC3H7AQ8IWR0 971 aaKnown RBP18.37■□□□□ 0.53
SPSB4-201ENST00000310546 SIX6OS1Q8N1H7 587 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 HPS1Q92902 700 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 NPLQ9BXD5 320 aaPredicted RBP18.37■□□□□ 0.53
SPSB4-201ENST00000310546 NACA2Q9H009 215 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 VPS28Q9UK41 221 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 VWA5AO00534 786 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 CLIC3O95833 236 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
SPSB4-201ENST00000310546 MAP4P27816 1152 aaKnown RBP18.37■□□□□ 0.53
SPSB4-201ENST00000310546 LIG4P49917 911 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 CMC1Q7Z7K0 106 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 RSAD1Q9HA92 442 aa18.37■□□□□ 0.53
SPSB4-201ENST00000310546 DAPK2Q9UIK4 370 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms