RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRIM43Q96BQ3 446 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 ALKBH8Q96BT7 664 aaKnown RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 OXNAD1Q96HP4 312 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 CDK5RAP1Q96SZ6 601 aaKnown RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 NOL6Q9H6R4 1146 aaKnown RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 DONSONQ9NYP3 566 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 HSFX1Q9UBD0 423 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 PSMD3O43242 534 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 ASMTLO95671 621 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 IL9RQ01113 521 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 LGSNQ5TDP6 509 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 RAP1GAP2Q684P5 730 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 TPGS2Q68CL5 300 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 FBXL22Q6P050 247 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 MICALCLQ6ZW33 695 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 OTOP3Q7RTS5 596 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 PDZD8Q8NEN9 1154 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 OVCA2Q8WZ82 227 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 MAGEB18Q96M61 343 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 HERC2P3Q9BVR0 1158 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 LRRC40Q9H9A6 602 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 TMEM248Q9NWD8 314 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 TCP11X1B4DZS4 312 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 CSH1P0DML2 217 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 CSH2P0DML3 217 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 NDST2P52849 883 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 WDR5P61964 334 aaKnown RBP21.72■■□□□ 1.07
ATG4D-201ENST00000309469 ALFQ53S48 1182 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 GKAP1Q5VSY0 366 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-201ENST00000309469 KLHDC8BQ8IXV7 354 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 CMTR2Q8IYT2 770 aaKnown RBP21.72■■□□□ 1.07
ATG4D-201ENST00000309469 BANPQ8N9N5 519 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 DNAAF3Q8N9W5 541 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 IGSF8Q969P0 613 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 TTC17Q96AE7 1141 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 PAIP2Q9BPZ3 127 aaKnown RBP21.72■■□□□ 1.07
ATG4D-201ENST00000309469 BFARQ9NZS9 450 aa21.72■■□□□ 1.07
ATG4D-201ENST00000309469 HBS1LQ9Y450 684 aaKnown RBP21.72■■□□□ 1.07
ATG4D-201ENST00000309469 DRGXA6NNA5 263 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 KIAA0355O15063 1070 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 UGT1A9O60656 530 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 EFCAB14O75071 495 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 KRT37O76014 449 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 CNTN5O94779 1100 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SNRPAP09012 282 aaKnown RBP21.71■■□□□ 1.07
ATG4D-201ENST00000309469 LAG3P18627 525 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 ATP5C1P36542 298 aaKnown RBP21.71■■□□□ 1.07
ATG4D-201ENST00000309469 MTA1Q13330 715 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 CRYMQ14894 314 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SNX30Q5VWJ9 437 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 TFAP2DQ7Z6R9 452 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SEC16BQ96JE7 1060 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SERAC1Q96JX3 654 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF512Q96ME7 567 aaPredicted RBP21.71■■□□□ 1.07
ATG4D-201ENST00000309469 FCRL5Q96RD9 977 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 KLF6Q99612 283 aaPredicted RBP21.71■■□□□ 1.07
ATG4D-201ENST00000309469 UGT1A7Q9HAW7 530 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 UGT1A10Q9HAW8 530 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 UGT1A8Q9HAW9 530 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SPG21Q9NZD8 308 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 UBP1Q9NZI7 540 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 SAMD15Q9P1V8 674 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 IPO11Q9UI26 975 aaKnown RBP21.71■■□□□ 1.07
ATG4D-201ENST00000309469 DNMT3LQ9UJW3 386 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 FAM169AQ9Y6X4 670 aa21.71■■□□□ 1.07
ATG4D-201ENST00000309469 GOLGA8RI6L899 631 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 ZWINTO95229 277 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 POLBP06746 335 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 HMGA1P17096 107 aaKnown RBP21.7■■□□□ 1.07
ATG4D-201ENST00000309469 SLC1A5Q15758 541 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 UNC5BQ8IZJ1 945 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 CYP4F11Q9HBI6 524 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 GLOD4Q9HC38 313 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 GGA2Q9UJY4 613 aa21.7■■□□□ 1.07
ATG4D-201ENST00000309469 AAR2Q9Y312 384 aaKnown RBP21.7■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF840PA6NDX5 716 aa21.7■■□□□ 1.06
ATG4D-201ENST00000309469 TRIM49D1C9J1S8 452 aa21.7■■□□□ 1.06
ATG4D-201ENST00000309469 RAG1P15918 1043 aa21.7■■□□□ 1.06
ATG4D-201ENST00000309469 NPY2RP49146 381 aa21.7■■□□□ 1.06
ATG4D-201ENST00000309469 SH2D5Q6ZV89 423 aa21.7■■□□□ 1.06
ATG4D-201ENST00000309469 ZNF419Q96HQ0 510 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-201ENST00000309469 NSRP1Q9H0G5 558 aaKnown RBP21.7■■□□□ 1.06
ATG4D-201ENST00000309469 RBM22Q9NW64 420 aaKnown RBP eCLIP21.7■■□□□ 1.06
ATG4D-201ENST00000309469 GREB1Q4ZG55 1949 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.69■■□□□ 1.06
ATG4D-201ENST00000309469 KRT38O76015 456 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 ACRP10323 421 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 ALDH1A3P47895 512 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 KCNQ1P51787 676 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 SLC18A2Q05940 514 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 ANO4Q32M45 955 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 SPANXN3Q5MJ09 141 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 NAPEPLDQ6IQ20 393 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 PIGWQ7Z7B1 504 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 DDX53Q86TM3 631 aaKnown RBP21.69■■□□□ 1.06
ATG4D-201ENST00000309469 CHSY1Q86X52 802 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 TMEM199Q8N511 208 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 TGS1Q96RS0 853 aaKnown RBP21.69■■□□□ 1.06
ATG4D-201ENST00000309469 ATXN2Q99700 1313 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms